RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 SPECC1LQ69YQ0 1117 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 RAET1GQ6H3X3 334 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 TIGD7Q6NT04 549 aaPredicted RBP20.8■□□□□ 0.92
CLDND1-216ENST00000507944 H2AFVQ71UI9 128 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 TECPR1Q7Z6L1 1165 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 CCNJLQ8IV13 435 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 GPBAR1Q8TDU6 330 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 SLC39A7Q92504 469 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 MAML1Q92585 1016 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 CCDC97Q96F63 343 aaPredicted RBP20.8■□□□□ 0.92
CLDND1-216ENST00000507944 ZNF670Q9BS34 389 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 FOXP3Q9BZS1 431 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 XPO4Q9C0E2 1151 aaKnown RBP20.8■□□□□ 0.92
CLDND1-216ENST00000507944 STRADBQ9C0K7 418 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 SUDS3Q9H7L9 328 aaPredicted RBP20.8■□□□□ 0.92
CLDND1-216ENST00000507944 GOLGA6AQ9NYA3 693 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 LRIT1Q9P2V4 623 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 UVRAGQ9P2Y5 699 aa20.8■□□□□ 0.92
CLDND1-216ENST00000507944 A0A0U1RQS6 177 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 TK2O00142 265 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 PLD2O14939 933 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 FZD6O60353 706 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 MAP3K6O95382 1288 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 FUCA1P04066 466 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 TPM3P06753 285 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 CCNB1P14635 433 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 CES1P23141 567 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 TEAD1P28347 426 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 TAS2R40P59535 323 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 CDK3Q00526 305 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 EIF3IQ13347 325 aaKnown RBP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 HLTFQ14527 1009 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 IFI16Q16666 785 aaKnown RBP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 RAB11FIP2Q7L804 512 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 CLEC14AQ86T13 490 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 MAP7D3Q8IWC1 876 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 FBXO39Q8N4B4 442 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 LSM14AQ8ND56 463 aaKnown RBP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 CTNNBL1Q8WYA6 563 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 TMEM74Q96NL1 305 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 TSGA13Q96PP4 275 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 PACSIN1Q9BY11 444 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 FRMD8Q9BZ67 464 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 CPNE5Q9HCH3 593 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 SPATS2LQ9NUQ6 558 aaKnown RBP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 RBM22Q9NW64 420 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLDND1-216ENST00000507944 RNF215Q9Y6U7 377 aa20.79■□□□□ 0.92
CLDND1-216ENST00000507944 MGAQ8IWI9 3026 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 NUDT21O43809 227 aaKnown RBP20.78■□□□□ 0.92
CLDND1-216ENST00000507944 ITGA2BP08514 1039 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 KRT7P08729 469 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 CCNCP24863 283 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 DSC2Q02487 901 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 DPTQ07507 201 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 ILF3Q12906 894 aaKnown RBP eCLIP20.78■□□□□ 0.92
CLDND1-216ENST00000507944 SLC18A3Q16572 532 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 ZSCAN23Q3MJ62 389 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 ARHGAP40Q5TG30 622 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 ALG1LQ6GMV1 187 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 NRROSQ86YC3 692 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 KIAA1524Q8TCG1 905 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 FATE1Q969F0 183 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 SMIM14Q96QK8 99 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 GSDMCQ9BYG8 508 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 TRNAU1APQ9NX07 287 aaKnown RBP20.78■□□□□ 0.92
CLDND1-216ENST00000507944 LCMT1Q9UIC8 334 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 ATXN7L1Q9ULK2 861 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-216ENST00000507944 SUFUQ9UMX1 484 aa20.78■□□□□ 0.92
CLDND1-216ENST00000507944 A0A0J9YYE9 177 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 TRBC1P01850 177 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 PRB1P04280 392 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 CCKBRP32239 447 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 UGT1A5P35504 534 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 GPR1P46091 355 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 GNPDA1P46926 289 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 EPHB1P54762 984 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 PTSQ03393 145 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 IHHQ14623 411 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 LRRC66Q68CR7 880 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 RFLNAQ6ZTI6 216 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 SPRED1Q7Z699 444 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 PQLC3Q8N755 202 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 OR8K1Q8NGG5 319 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 PTCD2Q8WV60 388 aaKnown RBP20.77■□□□□ 0.92
CLDND1-216ENST00000507944 FAF2Q96CS3 445 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 AP2M1Q96CW1 435 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 ABCG8Q9H221 673 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 HAUS2Q9NVX0 235 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 TAAR2Q9P1P5 351 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 AMACRQ9UHK6 382 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 CD84Q9UIB8 345 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 SLC17A4Q9Y2C5 497 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 SSUH2Q9Y2M2 353 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 TTLL3Q9Y4R7 772 aa20.77■□□□□ 0.92
CLDND1-216ENST00000507944 FGF1P05230 155 aa20.76■□□□□ 0.91
CLDND1-216ENST00000507944 MX2P20592 715 aa20.76■□□□□ 0.91
CLDND1-216ENST00000507944 PTMSP20962 102 aa20.76■□□□□ 0.91
CLDND1-216ENST00000507944 AK4P27144 223 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-216ENST00000507944 POLD2P49005 469 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms