RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CUZD1Q86UP6 607 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PRIMA1Q86XR5 153 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 SLC9A9Q8IVB4 645 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PLPP6Q8IY26 295 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 NETO2Q8NC67 525 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 CHDHQ8NE62 594 aaPredicted RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 OR2AP1Q8NGE2 309 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 GRHL3Q8TE85 626 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 RELTQ969Z4 430 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 ISG20Q96AZ6 181 aaKnown RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 TRAPPC9Q96Q05 1148 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 WDR26Q9H7D7 661 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 TMEM8AQ9HCN3 771 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PCDH12Q9NPG4 1184 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 SIDT1Q9NXL6 827 aaKnown RBP7.19□□□□□ -1.26
VCAN-207ENST00000507162 SERTAD1Q9UHV2 236 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 SUFUQ9UMX1 484 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PCDHGA10Q9Y5H3 936 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 ST14Q9Y5Y6 855 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 PIKFYVEQ9Y2I7 2098 aa7.19□□□□□ -1.26
VCAN-207ENST00000507162 NSD1Q96L73 2696 aaPredicted RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 ZNF469Q96JG9 3925 aaPredicted RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 ILVBLA1L0T0 632 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 PPP1R3GB7ZBB8 358 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 CCL21O00585 134 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 RECQL5O94762 991 aaPredicted RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 GSRP00390 522 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 CEACAM5P06731 702 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 HOXC4P09017 264 aaPredicted RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 ACVRL1P37023 503 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 ADCY8P40145 1251 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 KIR3DL1P43629 444 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 POLD2P49005 469 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 RRADP55042 308 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 GFERP55789 205 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 KCNK10P57789 538 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 YWHAEP62258 255 aaKnown RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 PDE1BQ01064 536 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 LRMPQ12912 555 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 EIF4EBP2Q13542 120 aaPredicted RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 CUL2Q13617 745 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 ZNF235Q14590 738 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 ASIC2Q16515 512 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 C5orf22Q49AR2 442 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 FAM69BQ5VUD6 431 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 ERAP2Q6P179 960 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 TMEM270Q6UE05 265 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 MED25Q71SY5 747 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 BEND5Q7L4P6 421 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 PPP1R3BQ86XI6 285 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 PLXDC1Q8IUK5 500 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 DRC7Q8IY82 874 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 DEFB106AQ8N104 65 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 TMEM102Q8N9M5 508 aaPredicted RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 FBXL13Q8NEE6 735 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 SLC37A2Q8TED4 501 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 PTCD2Q8WV60 388 aaKnown RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 FAR1Q8WVX9 515 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 MR1Q95460 341 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 DHX58Q96C10 678 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 C14orf79Q96F83 325 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 CCDC120Q96HB5 630 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 SGSM3Q96HU1 749 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 FAXDC2Q96IV6 333 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 TGM7Q96PF1 710 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 MED15Q96RN5 788 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 C7orf25Q9BPX7 421 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 ZSWIM1Q9BR11 485 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 FGF21Q9NSA1 209 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 TRNAU1APQ9NX07 287 aaKnown RBP7.18□□□□□ -1.26
VCAN-207ENST00000507162 PCDHB4Q9Y5E5 795 aa7.18□□□□□ -1.26
VCAN-207ENST00000507162 DRGXA6NNA5 263 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 A8MX80 341 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 E2F3O00716 465 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 JRKO75564 520 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 GRAP2O75791 330 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 RASSF9O75901 435 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 PIGNO95427 931 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 ALPPP05187 535 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 ERCC5P28715 1186 aaPredicted RBP7.17□□□□□ -1.26
VCAN-207ENST00000507162 TRIM23P36406 574 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 ACADSBP45954 432 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 HHEXQ03014 270 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 GNA12Q03113 381 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 Q0VFX4 171 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 FOXD4Q12950 439 aaPredicted RBP7.17□□□□□ -1.26
VCAN-207ENST00000507162 UGP2Q16851 508 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 TMCO4Q5TGY1 634 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 TMEM198Q66K66 360 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 DUS1LQ6P1R4 473 aaKnown RBP7.17□□□□□ -1.26
VCAN-207ENST00000507162 PNCKQ6P2M8 343 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 DOK6Q6PKX4 331 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 INTS8Q75QN2 995 aaKnown RBP7.17□□□□□ -1.26
VCAN-207ENST00000507162 PELI3Q8N2H9 469 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 C9orf72Q96LT7 481 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 SMR3AQ99954 134 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 NCAPGQ9BPX3 1015 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 TBC1D10AQ9BXI6 508 aa7.17□□□□□ -1.26
VCAN-207ENST00000507162 BRD8Q9H0E9 1235 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms