RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SPTLC3Q9NUV7 552 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 GOLGA6AQ9NYA3 693 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 ATXN7L1Q9ULK2 861 aaPredicted RBP16.24■□□□□ 0.19
SCLT1-204ENST00000503215 PLEKHM1Q9Y4G2 1056 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 TTLL3Q9Y4R7 772 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 RNF215Q9Y6U7 377 aa16.24■□□□□ 0.19
SCLT1-204ENST00000503215 HLA-DQB2P05538 268 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 KELP23276 732 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 KDELR1P24390 212 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 AK4P27144 223 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-204ENST00000503215 PCBP4P57723 403 aaKnown RBP16.23■□□□□ 0.19
SCLT1-204ENST00000503215 ERVPABLB-1P60509 514 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 PTSQ03393 145 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 PDK2Q15119 407 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 IFI16Q16666 785 aaKnown RBP16.23■□□□□ 0.19
SCLT1-204ENST00000503215 TRIM74Q86UV6 250 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 LSMEM2Q8N112 164 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 RNF214Q8ND24 703 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 ZNF248Q8NDW4 579 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 SLC35G2Q8TBE7 412 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 SCAMP4Q969E2 229 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 FCRL3Q96P31 734 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-204ENST00000503215 LRRN3Q9H3W5 708 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 DPEP2Q9H4A9 486 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 PHPT1Q9NRX4 125 aaPredicted RBP16.23■□□□□ 0.19
SCLT1-204ENST00000503215 DTLQ9NZJ0 730 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 TMEM98Q9Y2Y6 226 aa16.23■□□□□ 0.19
SCLT1-204ENST00000503215 BAHCC1Q9P281 2608 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 D6RAR5 112 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 AKR1B10O60218 316 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 TNFSF15O95150 251 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 PRB1P04280 392 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 TMEM253P0C7T8 217 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 HGFP14210 728 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 CCNB1P14635 433 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 CCNCP24863 283 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 RBMS1P29558 406 aaKnown RBP16.22■□□□□ 0.19
SCLT1-204ENST00000503215 GNPDA1P46926 289 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 MAZP56270 477 aaKnown RBP16.22■□□□□ 0.19
SCLT1-204ENST00000503215 ARHGEF7Q14155 803 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 HLTFQ14527 1009 aaKnown RBP eCLIP16.22■□□□□ 0.193e-6■■□□□ 14.5
SCLT1-204ENST00000503215 C14orf28Q4W4Y0 310 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 CERCAMQ5T4B2 595 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 ALG1LQ6GMV1 187 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 RAET1GQ6H3X3 334 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 DOK6Q6PKX4 331 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 USP45Q70EL2 814 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 B4GALNT4Q76KP1 1039 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 TMPRSS9Q7Z410 1059 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 CCNJLQ8IV13 435 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 VSTM4Q8IW00 320 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 GPBAR1Q8TDU6 330 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 RNF157Q96PX1 679 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 GFM1Q96RP9 751 aaKnown RBP16.22■□□□□ 0.19
SCLT1-204ENST00000503215 POLR1EQ9GZS1 481 aaKnown RBP16.22■□□□□ 0.19
SCLT1-204ENST00000503215 CPNE5Q9HCH3 593 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 SUFUQ9UMX1 484 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 HYOU1Q9Y4L1 999 aa16.22■□□□□ 0.19
SCLT1-204ENST00000503215 A0A0J9YYE9 177 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 SSU72P8A0A1W2PR75 194 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 C3orf70A6NLC5 250 aaPredicted RBP16.21■□□□□ 0.19
SCLT1-204ENST00000503215 CDRT15L2A8MXV6 281 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 KCNK1O00180 336 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 PSMD11O00231 422 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 JCHAINP01591 159 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 TRBC1P01850 177 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 FGF1P05230 155 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 MMP2P08253 660 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 KRT7P08729 469 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 MAN1A1P33908 653 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 CXADRP78310 365 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 ZFYVE27Q5T4F4 411 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 PLD5Q8N7P1 536 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 CNTD1Q8N815 330 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 CCNYQ8ND76 341 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 WDR36Q8NI36 951 aaKnown RBP16.21■□□□□ 0.19
SCLT1-204ENST00000503215 KCNE4Q8WWG9 221 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 PATE1Q8WXA2 126 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 GRAMD1AQ96CP6 724 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 TDRD1Q9BXT4 1180 aaKnown RBP16.21■□□□□ 0.19
SCLT1-204ENST00000503215 DEF6Q9H4E7 631 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 NHEJ1Q9H9Q4 299 aaPredicted RBP16.21■□□□□ 0.19
SCLT1-204ENST00000503215 EPB41L5Q9HCM4 733 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 THSD1Q9NS62 852 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 ABHD10Q9NUJ1 306 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 LRIT1Q9P2V4 623 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 PCDHGA8Q9Y5G5 932 aa16.21■□□□□ 0.19
SCLT1-204ENST00000503215 PCYT1BQ9Y5K3 369 aaPredicted RBP16.21■□□□□ 0.19
SCLT1-204ENST00000503215 CCDC187A0A096LP49 1063 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 LRRD1A4D1F6 860 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 PDE2AO00408 941 aaPredicted RBP16.2■□□□□ 0.18
SCLT1-204ENST00000503215 KLK10O43240 276 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 B4GAT1O43505 415 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 CLDN7O95471 211 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 TPM3P06753 285 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 GLB1P16278 677 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 ADCY8P40145 1251 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 GPR1P46091 355 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 STC1P52823 247 aa16.2■□□□□ 0.18
SCLT1-204ENST00000503215 SKOR1P84550 965 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms