RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 AGAP3Q96P47 875 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 TEX101Q9BY14 249 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 PADI4Q9UM07 663 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 GPR34Q9UPC5 381 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 RAXQ9Y2V3 346 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 AK5Q9Y6K8 562 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 LRP4O75096 1905 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 KNTC1P50748 2209 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 CAPN8A6NHC0 703 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 IPO7O95373 1038 aaKnown RBP33.16■■■□□ 2.9
CBX4-203ENST00000494546 ZNF30P17039 623 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 RPL26P61254 145 aaKnown RBP33.16■■■□□ 2.9
CBX4-203ENST00000494546 SKOR1P84550 965 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 PTSQ03393 145 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 PERM1Q5SV97 790 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 CDCP2Q5VXM1 449 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 C11orf63Q6NUN7 778 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 BRD8Q9H0E9 1235 aa33.16■■■□□ 2.9
CBX4-203ENST00000494546 SUDS3Q9H7L9 328 aaPredicted RBP33.16■■■□□ 2.9
CBX4-203ENST00000494546 SAE1Q9UBE0 346 aaPredicted RBP33.16■■■□□ 2.9
CBX4-203ENST00000494546 RPL26L1Q9UNX3 145 aaKnown RBP33.16■■■□□ 2.9
CBX4-203ENST00000494546 CST8O60676 142 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 TGM2P21980 687 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 CDK3Q00526 305 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 TAZQ16635 292 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 TAF8Q7Z7C8 310 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 DAAM2Q86T65 1068 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 ARL10Q8N8L6 244 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 KYQ8NBH2 561 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 NAT6Q93015 286 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 AP2M1Q96CW1 435 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 DEPDC7Q96QD5 511 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 NRSN2Q9GZP1 204 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 TMEM168Q9H0V1 697 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 ABCG8Q9H221 673 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 DNPEPQ9ULA0 475 aa33.15■■■□□ 2.9
CBX4-203ENST00000494546 MYLKQ15746 1914 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 PRSS38A1L453 326 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 ZRANB2O95218 330 aaKnown RBP eCLIP33.14■■■□□ 2.9
CBX4-203ENST00000494546 FECHP22830 423 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 GPR1P46091 355 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 MARCKSL1P49006 195 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 NR2C2P49116 596 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 BZW1Q7L1Q6 419 aaKnown RBP33.14■■■□□ 2.9
CBX4-203ENST00000494546 CCDC50Q8IVM0 306 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 KATNAL2Q8IYT4 538 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 CARS2Q9HA77 564 aaKnown RBP33.14■■■□□ 2.9
CBX4-203ENST00000494546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP33.14■■■□□ 2.9
CBX4-203ENST00000494546 PCDHB1Q9Y5F3 818 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 FREM2Q5SZK8 3169 aa33.14■■■□□ 2.9
CBX4-203ENST00000494546 RCCD1A6NED2 376 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 CLDN7O95471 211 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 STC1P52823 247 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 DPTQ07507 201 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 TFDP3Q5H9I0 405 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 NT5DC3Q86UY8 548 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 RCOR2Q8IZ40 523 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 SCAMP4Q969E2 229 aa33.13■■■□□ 2.89
CBX4-203ENST00000494546 CSO75390 466 aaKnown RBP33.12■■■□□ 2.89
CBX4-203ENST00000494546 PECAM1P16284 738 aaPredicted RBP33.12■■■□□ 2.89
CBX4-203ENST00000494546 TEAD1P28347 426 aa33.12■■■□□ 2.89
CBX4-203ENST00000494546 NAP1L1P55209 391 aaKnown RBP33.12■■■□□ 2.89
CBX4-203ENST00000494546 QPCTQ16769 361 aa33.12■■■□□ 2.89
CBX4-203ENST00000494546 RAD9BQ6WBX8 426 aa33.12■■■□□ 2.89
CBX4-203ENST00000494546 FAM46DQ8NEK8 389 aa33.12■■■□□ 2.89
CBX4-203ENST00000494546 CCL4L1Q8NHW4 92 aa33.12■■■□□ 2.89
CBX4-203ENST00000494546 MLPHQ9BV36 600 aaPredicted RBP33.12■■■□□ 2.89
CBX4-203ENST00000494546 ADGRE3Q9BY15 652 aa33.12■■■□□ 2.89
CBX4-203ENST00000494546 C1orf232A0A0U1RR37 186 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 ANKRD66B4E2M5 251 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 CEACAM5P06731 702 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 ADCY2Q08462 1091 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 GALNT3Q14435 633 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 RTP5Q14D33 572 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 KDELC2Q7Z4H8 507 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 TFB1MQ8WVM0 346 aaKnown RBP33.11■■■□□ 2.89
CBX4-203ENST00000494546 KRT35Q92764 455 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 IMP4Q96G21 291 aaKnown RBP33.11■■■□□ 2.89
CBX4-203ENST00000494546 CCDC3Q9BQI4 270 aa33.11■■■□□ 2.89
CBX4-203ENST00000494546 FRMD8Q9BZ67 464 aaPredicted RBP33.11■■■□□ 2.89
CBX4-203ENST00000494546 hCG_1818297A0A087WSY0 165 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 POLD2P49005 469 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 PRKD1Q15139 912 aaPredicted RBP33.1■■■□□ 2.89
CBX4-203ENST00000494546 PCSK7Q16549 785 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 DOK6Q6PKX4 331 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 ZNF765Q7L2R6 523 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 P3H4Q92791 437 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 HAUS1Q96CS2 278 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 RBM41Q96IZ5 413 aaKnown RBP33.1■■■□□ 2.89
CBX4-203ENST00000494546 LYSMD1Q96S90 227 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 RIOK2Q9BVS4 552 aaKnown RBP33.1■■■□□ 2.89
CBX4-203ENST00000494546 SLC25A51Q9H1U9 297 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 SYNDIG1Q9H7V2 258 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 REXO2Q9Y3B8 237 aaKnown RBP33.1■■■□□ 2.89
CBX4-203ENST00000494546 DUSP10Q9Y6W6 482 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 DMXL2Q8TDJ6 3036 aa33.1■■■□□ 2.89
CBX4-203ENST00000494546 SOD1P00441 154 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 FUCA1P04066 466 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 PTPN3P26045 913 aa33.09■■■□□ 2.89
CBX4-203ENST00000494546 GNPDA1P46926 289 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms