RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 LIN37Q96GY3 246 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 CHP1Q99653 195 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 GSDMCQ9BYG8 508 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 NT5MQ9NPB1 228 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 AKAP7Q9P0M2 348 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 CTTNBP2NLQ9P2B4 639 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 DNPEPQ9ULA0 475 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 SCN8AQ9UQD0 1980 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 KNTC1P50748 2209 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 A0A1W2PQM1 296 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 PRSS38A1L453 326 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 CAPN8A6NHC0 703 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 NOBOXO60393 691 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 PROSCO94903 275 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 PGLSO95336 258 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 SOD1P00441 154 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 ITGA2BP08514 1039 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 CTPS1P17812 591 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 CCL7P80098 99 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 GBE1Q04446 702 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 GALNT2Q10471 571 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 PDK2Q15119 407 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 C14orf28Q4W4Y0 310 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 TAF1BQ53T94 588 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 ANKRD20A8PQ5CZ79 823 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 RAET1GQ6H3X3 334 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 OGFOD3Q6PK18 319 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 B3GNT8Q7Z7M8 397 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 NRROSQ86YC3 692 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 CCNJLQ8IV13 435 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 Q8N9G6 341 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 RAPGEF5Q92565 580 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 MAML1Q92585 1016 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 TMEM159Q96B96 161 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 FAF2Q96CS3 445 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 MCCC1Q96RQ3 725 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 POLR1EQ9GZS1 481 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 SUDS3Q9H7L9 328 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 CARS2Q9HA77 564 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 LRIT1Q9P2V4 623 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 ATRXP46100 2492 aa13.38□□□□□ -0.27
CTDSP1-212ENST00000494067 C3orf70A6NLC5 250 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 B4DGG1 531 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 D6RAR5 112 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 PLD2O14939 933 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 NUDT21O43809 227 aaKnown RBP13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 PRLP01236 227 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 PYGLP06737 847 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 KRT7P08729 469 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 TPM1P09493 284 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 JMJD7P0C870 316 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 MX2P20592 715 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 GPR1P46091 355 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 RHDQ02161 417 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 DSC2Q02487 901 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 IFI16Q16666 785 aaKnown RBP13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 SPECC1LQ69YQ0 1117 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 ALG1LQ6GMV1 187 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 Q6ZVL8 140 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 TMPRSS9Q7Z410 1059 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 TECPR1Q7Z6L1 1165 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 HEATR4Q86WZ0 1026 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 JAMLQ86YT9 394 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 ARRDC2Q8TBH0 407 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 DTD2Q96FN9 168 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 ZNF830Q96NB3 372 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 SEMA3CQ99985 751 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 TEX101Q9BY14 249 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 UVRAGQ9P2Y5 699 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 AMACRQ9UHK6 382 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 PPIL1Q9Y3C6 166 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 TTLL3Q9Y4R7 772 aa13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 PCYT1BQ9Y5K3 369 aaPredicted RBP13.37□□□□□ -0.27
CTDSP1-212ENST00000494067 RHPN2P1A8MT19 583 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 CDRT15L2A8MXV6 281 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 MATN3O15232 486 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 CBFA2T2O43439 604 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 HLA-DQB2P05538 268 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 CEACAM5P06731 702 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 CCNB1P14635 433 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 ZNF30P17039 623 aa13.36□□□□□ -0.27
CTDSP1-212ENST00000494067 CCNCP24863 283 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms