RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 SLC17A9Q9BYT1 436 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 FAM83DQ9H4H8 585 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 SAYSD1Q9NPB0 183 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 C11orf16Q9NQ32 467 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 PIH1D1Q9NWS0 290 aaKnown RBP14.9□□□□□ -0.02
ACTB-213ENST00000493945 SYBUQ9NX95 663 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 ZC3H7BQ9UGR2 993 aaKnown RBP14.9□□□□□ -0.02
ACTB-213ENST00000493945 SLC30A1Q9Y6M5 507 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 CEP192Q8TEP8 1941 aa14.9□□□□□ -0.02
ACTB-213ENST00000493945 EML5Q05BV3 1969 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 A8MX80 341 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 E7ESA3 106 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 PRAMEF26H0Y7S4 382 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 FPGTO14772 594 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 RECQL5O94762 991 aaPredicted RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 GNSP15586 552 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 LHCGRP22888 699 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 GRIA1P42261 906 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 ZNF140P52738 457 aaPredicted RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 DHX9Q08211 1270 aaKnown RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 ILF2Q12905 390 aaKnown RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 LRRC14Q15048 493 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 TMEM259Q4ZIN3 620 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 SPANXN3Q5MJ09 141 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 TSPAN33Q86UF1 283 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 NLRP8Q86W28 1048 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 CNPY4Q8N129 248 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 TTC30BQ8N4P2 665 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 LRRN4CLQ8ND94 238 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 OR4K2Q8NGD2 314 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 DTX3LQ8TDB6 740 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 ULK4Q96C45 1275 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 AP2M1Q96CW1 435 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 EBNA1BP2Q99848 306 aaKnown RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 C1QTNF2Q9BXJ5 285 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 ZCCHC2Q9C0B9 1178 aaKnown RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 DUSP15Q9H1R2 295 aaPredicted RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 NLE1Q9NVX2 485 aaPredicted RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 IL17CQ9P0M4 197 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 NFU1Q9UMS0 254 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 VPS9D1Q9Y2B5 631 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 SPO11Q9Y5K1 396 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 ARL5AQ9Y689 179 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 RPS6KL1Q9Y6S9 549 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 SCN8AQ9UQD0 1980 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 NUMA1Q14980 2115 aa14.89□□□□□ -0.03
ACTB-213ENST00000493945 ZNF106Q9H2Y7 1883 aaKnown RBP14.89□□□□□ -0.03
ACTB-213ENST00000493945 MYLKQ15746 1914 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 THADAQ6YHU6 1953 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 GLYATL1P3A0A0U1RQE8 302 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 IGLON5A6NGN9 336 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 MROH6A6NGR9 719 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 METTL12A8MUP2 240 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 PRR5-ARHGAP8B1AHC4 643 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 BHMG1C9JSJ3 638 aaPredicted RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 DLL1O00548 723 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 LATO43561 262 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 LDB2O43679 373 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 C1SP09871 688 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 CD27P26842 260 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 TEAD1P28347 426 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 CARSP49589 748 aaKnown RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 CREB5Q02930 508 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 PTSQ03393 145 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 DPTQ07507 201 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 CBLBQ13191 982 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 THOC5Q13769 683 aaKnown RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 ERCC6LQ2NKX8 1250 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 LYSMD4Q5XG99 296 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 RAET1GQ6H3X3 334 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 KIAA0930Q6ICG6 404 aaPredicted RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 ZDHHC24Q6UX98 284 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 RGL4Q8IZJ4 473 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 MAML2Q8IZL2 1156 aaPredicted RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 TRAM1L1Q8N609 369 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.88□□□□□ -0.037e-7■■□□□ 13.1
ACTB-213ENST00000493945 ZBTB44Q8NCP5 570 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 FBXO36Q8NEA4 188 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 HEXDCQ8WVB3 486 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 SCG3Q8WXD2 468 aaKnown RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 CDKL2Q92772 493 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 NELL1Q92832 810 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 COQ10AQ96MF6 247 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 HSPA12BQ96MM6 686 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 LENG8Q96PV6 779 aaPredicted RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 LRFN3Q9BTN0 628 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 SPATA16Q9BXB7 569 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 ANKZF1Q9H8Y5 726 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 ZDHHC18Q9NUE0 388 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 ARGLU1Q9NWB6 273 aaPredicted RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 GGT7Q9UJ14 662 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 CHMP2BQ9UQN3 213 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.88□□□□□ -0.03
ACTB-213ENST00000493945 ZNF318Q5VUA4 2279 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 PLXNA2O75051 1894 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 LRRK1Q38SD2 2015 aa14.88□□□□□ -0.03
ACTB-213ENST00000493945 A0A0C4DFX4 3053 aa14.87□□□□□ -0.03
ACTB-213ENST00000493945 A0A1W2PPC4 97 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms