RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TTLL3Q9Y4R7 772 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 PCDHA13Q9Y5I0 950 aa12.6□□□□□ -0.39
HSPG2-212ENST00000493940 SOWAHDA6NJG2 315 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 ZNF487B1APH4 448 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 NOBOXO60393 691 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 BRINP1O60477 761 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 TNFP01375 233 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 GP1BAP07359 652 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 TPM1P09493 284 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 CTSEP14091 401 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 FECHP22830 423 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 ITPKBP27987 946 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 CD86P42081 329 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 HADHBP55084 474 aaKnown RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 DYNLT1P63172 113 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 IFI35P80217 286 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 NR0B2Q15466 257 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 QPCTQ16769 361 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 LRRC38Q5VT99 294 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 TIGD7Q6NT04 549 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 OGFOD3Q6PK18 319 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 RAD9BQ6WBX8 426 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 KDELC2Q7Z4H8 507 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 TRIM74Q86UV6 250 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 BBS5Q8N3I7 341 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 GPR156Q8NFN8 814 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 SPATA22Q8NHS9 363 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 MAPK15Q8TD08 544 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 KRT35Q92764 455 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 TADA1Q96BN2 335 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 PRR11Q96HE9 360 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 FRMD8Q9BZ67 464 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 NRSN2Q9GZP1 204 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 SPATS2LQ9NUQ6 558 aaKnown RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 CNOT6Q9ULM6 557 aaKnown RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 ENTPD2Q9Y5L3 495 aa12.59□□□□□ -0.39
HSPG2-212ENST00000493940 GCN1Q92616 2671 aaKnown RBP12.59□□□□□ -0.39
HSPG2-212ENST00000493940 ATMQ13315 3056 aa12.58□□□□□ -0.39
HSPG2-212ENST00000493940 A0A1W2PQ67 120 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 A0A1W2PQM1 296 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 PRSS38A1L453 326 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 APOL1O14791 398 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 CSO75390 466 aaKnown RBP12.58□□□□□ -0.4
HSPG2-212ENST00000493940 MPOP05164 745 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 PIRTP0C851 137 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-212ENST00000493940 HTR1BP28222 390 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 CD68P34810 354 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-212ENST00000493940 DUSP3P51452 185 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-212ENST00000493940 STC1P52823 247 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 CDK3Q00526 305 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 AP1B1Q10567 949 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 GALNT3Q14435 633 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 TMPRSS9Q7Z410 1059 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 RFX6Q8HWS3 928 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 TMEM139Q8IV31 216 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 RHOT1Q8IXI2 618 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 LPCAT1Q8NF37 534 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 PATE1Q8WXA2 126 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 AGAP3Q96P47 875 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 TRIB3Q96RU7 358 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 CCDC3Q9BQI4 270 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 LACRTQ9GZZ8 138 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 WDR26Q9H7D7 661 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 C10orf88Q9H8K7 445 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 PCDH9Q9HC56 1237 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 AMACRQ9UHK6 382 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 MOSPD1Q9UJG1 213 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 GPR34Q9UPC5 381 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 TMEM98Q9Y2Y6 226 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 OAS3Q9Y6K5 1087 aaKnown RBP12.58□□□□□ -0.4
HSPG2-212ENST00000493940 AK5Q9Y6K8 562 aa12.58□□□□□ -0.4
HSPG2-212ENST00000493940 AHCTF1Q8WYP5 2266 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 CAPN8A6NHC0 703 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 FADS2P1A8MWK0 482 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 ANKRD66B4E2M5 251 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 PSMD11O00231 422 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 CACNB4O00305 520 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 NTN3O00634 580 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 TNFRSF10CO14798 259 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 USP12O75317 370 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 CYP2A6P11509 494 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 MYCLP1P12525 358 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 MX2P20592 715 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 EIF2S3P41091 472 aaKnown RBP12.57□□□□□ -0.4
HSPG2-212ENST00000493940 BLKP51451 505 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 CCL7P80098 99 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 DPTQ07507 201 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 WASHC5Q12768 1159 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 ELOCQ15369 112 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 KAZNQ674X7 775 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 RAET1GQ6H3X3 334 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 AADACL2Q6P093 401 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 LVRNQ6Q4G3 990 aa12.57□□□□□ -0.4
HSPG2-212ENST00000493940 USP45Q70EL2 814 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms