RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FOXK1P85037 733 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 UBAP2LQ14157 1087 aaKnown RBP13.67□□□□□ -0.22
SAMM50-204ENST00000493161 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 ANKS6Q68DC2 871 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 DOK6Q6PKX4 331 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 RFX8Q6ZV50 586 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 Q6ZVL8 140 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 CYP4V2Q6ZWL3 525 aaPredicted RBP13.67□□□□□ -0.22
SAMM50-204ENST00000493161 UNC5BQ8IZJ1 945 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 FNIP1Q8TF40 1166 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
SAMM50-204ENST00000493161 SNRNP25Q9BV90 132 aaKnown RBP13.67□□□□□ -0.22
SAMM50-204ENST00000493161 CDH19Q9H159 772 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 SP110Q9HB58 689 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 PHPT1Q9NRX4 125 aaPredicted RBP13.67□□□□□ -0.22
SAMM50-204ENST00000493161 TRNAU1APQ9NX07 287 aaKnown RBP13.67□□□□□ -0.22
SAMM50-204ENST00000493161 TAS2R14Q9NYV8 317 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 PCSK1NQ9UHG2 260 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 TMEM98Q9Y2Y6 226 aa13.67□□□□□ -0.22
SAMM50-204ENST00000493161 ANKRD62A6NC57 917 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 NPIPB15A6NHN6 443 aaPredicted RBP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 EFCAB7A8K855 629 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 RAD1O60671 282 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 PEX11BO96011 259 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 VIPR1P32241 457 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 CSTF2P33240 577 aaKnown RBP eCLIP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 HTR7P34969 479 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 GPR3P46089 330 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 AP1S1P61966 158 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 IL10RBQ08334 325 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 SQSTM1Q13501 440 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 LBRQ14739 615 aaKnown RBP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 SYCP1Q15431 976 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 CLPPQ16740 277 aaPredicted RBP13.66□□□□□ -0.22
SAMM50-204ENST00000493161 DCUN1D2Q6PH85 259 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 TSPAN33Q86UF1 283 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 FAM129CQ86XR2 697 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 MCOLN2Q8IZK6 566 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 BMPERQ8N8U9 685 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 DTD2Q96FN9 168 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 SMIM14Q96QK8 99 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 PSKH2Q96QS6 385 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 CTRCQ99895 268 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 DDA1Q9BW61 102 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 SPRY4Q9C004 299 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 TRIM7Q9C029 511 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 KCNK4Q9NYG8 393 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 DACH1Q9UI36 760 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 PILRAQ9UKJ1 303 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 SLC17A4Q9Y2C5 497 aa13.66□□□□□ -0.22
SAMM50-204ENST00000493161 LOC101059948A0A1B0GTJ6 334 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CLEC18AA5D8T8 446 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 A8MU76 341 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 DAPK3O43293 454 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 EML2O95834 649 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 SOD1P00441 154 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CPP00450 1065 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CR2P20023 1033 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 PSMA2P25787 234 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CASRP41180 1078 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 ACTR1BP42025 376 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CCR10P46092 362 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 ACTR1AP61163 376 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 TRAF2Q12933 501 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 BIRC2Q13490 618 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 RFTN1Q14699 578 aaPredicted RBP13.65□□□□□ -0.22
SAMM50-204ENST00000493161 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
SAMM50-204ENST00000493161 ERMARDQ5T6L9 678 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 RAET1GQ6H3X3 334 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 ACAD10Q6JQN1 1059 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CLEC18BQ6UXF7 455 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 MARK2Q7KZI7 788 aaKnown RBP13.65□□□□□ -0.22
SAMM50-204ENST00000493161 TIPARPQ7Z3E1 657 aaKnown RBP13.65□□□□□ -0.22
SAMM50-204ENST00000493161 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 NRSN1Q8IZ57 195 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CLEC18CQ8NCF0 446 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 RNF31Q96EP0 1072 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 NOD2Q9HC29 1040 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CWC15Q9P013 229 aaKnown RBP13.65□□□□□ -0.22
SAMM50-204ENST00000493161 SEPT3Q9UH03 358 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 CD84Q9UIB8 345 aa13.65□□□□□ -0.22
SAMM50-204ENST00000493161 PCYT1BQ9Y5K3 369 aaPredicted RBP13.65□□□□□ -0.22
SAMM50-204ENST00000493161 ZNF891A8MT65 544 aaPredicted RBP13.64□□□□□ -0.23
SAMM50-204ENST00000493161 TMCO5BA8MYB1 307 aa13.64□□□□□ -0.23
SAMM50-204ENST00000493161 B4E171 279 aa13.64□□□□□ -0.23
SAMM50-204ENST00000493161 IVLP07476 585 aa13.64□□□□□ -0.23
SAMM50-204ENST00000493161 CTPS1P17812 591 aa13.64□□□□□ -0.23
SAMM50-204ENST00000493161 TSPAN7P41732 249 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms