RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 C1QTNF12Q5T7M4 302 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CYP4V2Q6ZWL3 525 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 JAMLQ86YT9 394 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 NETO2Q8NC67 525 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 NSMCE1Q8WV22 266 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 NUS1Q96E22 293 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 DTD2Q96FN9 168 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 GBP4Q96PP9 640 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 MGME1Q9BQP7 344 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 BPIFA3Q9BQP9 254 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 FRMD8Q9BZ67 464 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 SEMA4CQ9C0C4 833 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 TMEM168Q9H0V1 697 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 HSD3B7Q9H2F3 369 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 MED4Q9NPJ6 270 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 HAUS2Q9NVX0 235 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 TAS2R14Q9NYV8 317 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 CWC15Q9P013 229 aaKnown RBP9.13□□□□□ -0.95
HDAC3-212ENST00000492407 B4GALT6Q9UBX8 382 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 PISDQ9UG56 409 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 PCSK1NQ9UHG2 260 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 AMACRQ9UHK6 382 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 DNPEPQ9ULA0 475 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 SLC17A4Q9Y2C5 497 aa9.13□□□□□ -0.95
HDAC3-212ENST00000492407 RHPN2P1A8MT19 583 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 SMTNL1A8MU46 457 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 GOLGA6L22H0YM25 854 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 B4GAT1O43505 415 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 MBD3O95983 291 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 CPP00450 1065 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 KCNC4Q03721 635 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 SLC10A7Q0GE19 358 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 PIGHQ14442 188 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 LINC00303Q3SY05 128 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 FILIP1LQ4L180 1135 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 FIGNQ5HY92 759 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 MANEAQ5SRI9 462 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 MARC1Q5VT66 337 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 KIAA1614Q5VZ46 1190 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 TMCO3Q6UWJ1 677 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 USP45Q70EL2 814 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 ZNF765Q7L2R6 523 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 POLNQ7Z5Q5 900 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 NRROSQ86YC3 692 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 NPWQ8N729 165 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 Q8N9G6 341 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 CCDC112Q8NEF3 446 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 OR4D9Q8NGE8 314 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 ZDHHC1Q8WTX9 485 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 TEKT4Q8WW24 435 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 FATE1Q969F0 183 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 TAAR9Q96RI9 348 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 PEBP4Q96S96 227 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 LGR4Q9BXB1 951 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 FOXP3Q9BZS1 431 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 CDH19Q9H159 772 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 ISCUQ9H1K1 167 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 CLMPQ9H6B4 373 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 HAUS4Q9H6D7 363 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 CARS2Q9HA77 564 aaKnown RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 MRPL40Q9NQ50 206 aaKnown RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 STARD5Q9NSY2 213 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 SPATS2LQ9NUQ6 558 aaKnown RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 GPATCH2LQ9NWQ4 482 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 RCOR3Q9P2K3 495 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 CNOT8Q9UFF9 292 aaKnown RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 BZW2Q9Y6E2 419 aaKnown RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 TDRD6O60522 2096 aaKnown RBP9.12□□□□□ -0.95
HDAC3-212ENST00000492407 TENM4Q6N022 2769 aa9.12□□□□□ -0.95
HDAC3-212ENST00000492407 PRAMEF33A0A0G2JMD5 474 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 LRRC53A6NM62 1247 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 B4DGG1 531 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 C9orf172C9J069 976 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 STMND1H3BQB6 276 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CASC3O15234 703 aaKnown RBP9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CAPN5O15484 640 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-212ENST00000492407 TEX33O43247 280 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CBFA2T2O43439 604 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 FZD6O60353 706 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 MAFKO60675 156 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 PGLSO95336 258 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 WISP1O95388 367 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 PRKCGP05129 697 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 HGFP14210 728 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ZNF30P17039 623 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CD1CP29017 333 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CSRP3P50461 194 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ATP1A2P50993 1020 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 LIMK2P53671 638 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 RPL26P61254 145 aaKnown RBP9.11□□□□□ -0.95
HDAC3-212ENST00000492407 GPLD1P80108 840 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CDK3Q00526 305 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 KLHL30Q0D2K2 578 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CNGA3Q16281 694 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ASIC2Q16515 512 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 MAP9Q49MG5 647 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms