RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CCNJLQ8IV13 435 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 SFTPA2Q8IWL1 248 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 BBS5Q8N3I7 341 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ARL14Q8N4G2 192 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ATPAF2Q8N5M1 289 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 PQLC3Q8N755 202 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ARRDC2Q8TBH0 407 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 KCNE4Q8WWG9 221 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 SLC39A7Q92504 469 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 TTC9Q92623 222 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 TMEM159Q96B96 161 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 NUS1Q96E22 293 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 LGMNQ99538 433 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 DNAJC7Q99615 494 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF670Q9BS34 389 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 MRPL40Q9NQ50 206 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 SPATS2LQ9NUQ6 558 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 UVRAGQ9P2Y5 699 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 GULP1Q9UBP9 304 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 LCMT1Q9UIC8 334 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 RPL26L1Q9UNX3 145 aaKnown RBP8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
SMARCB1-207ENST00000491967 A0A0J9YYE9 177 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 C3orf70A6NLC5 250 aaPredicted RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 A8MX80 341 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 K7ENP7 123 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 B4GAT1O43505 415 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 MTA2O94776 668 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 PROSCO94903 275 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TNFSF15O95150 251 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CPP00450 1065 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TRBC1P01850 177 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 RPLP0P05388 317 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CYP2A6P11509 494 aaPredicted RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CCNB1P14635 433 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF30P17039 623 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 NFKBIAP25963 317 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 UGT1A5P35504 534 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 STC1P52823 247 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 INHBCP55103 352 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TAS2R40P59535 323 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 MAXP61244 160 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 RHDQ02161 417 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 VAC14Q08AM6 782 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CLN3Q13286 438 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SLC18A3Q16572 532 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TDRD12Q587J7 1177 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CCDC122Q5T0U0 273 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 ARMC12Q5T9G4 340 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 INO80CQ6PI98 192 aaPredicted RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 RFLNAQ6ZTI6 216 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TMPRSS9Q7Z410 1059 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TAF8Q7Z7C8 310 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TSPAN33Q86UF1 283 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CPNE8Q86YQ8 564 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SLITRK4Q8IW52 837 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 FAM46DQ8NEK8 389 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 COX14Q96I36 57 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TMEM74Q96NL1 305 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 GFM1Q96RP9 751 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 WDR24Q96S15 920 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SEMA3CQ99985 751 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 POLR1EQ9GZS1 481 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 ABCG8Q9H221 673 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 CYP4F12Q9HCS2 524 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 PHPT1Q9NRX4 125 aaPredicted RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SIRPGQ9P1W8 387 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 LRIT1Q9P2V4 623 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 RNF215Q9Y6U7 377 aa8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 TLN1Q9Y490 2541 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SETXQ7Z333 2677 aaKnown RBP8.36□□□□□ -1.07
SMARCB1-207ENST00000491967 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 KLK10O43240 276 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 MFSD11O43934 449 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 MMP2P08253 660 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 SLC5A2P31639 672 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 CASP14P31944 242 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 GPR3P46089 330 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 TPM4P67936 248 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 CXADRP78310 365 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 NIPAL4Q0D2K0 466 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 IFI16Q16666 785 aaKnown RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 HADHQ16836 314 aaKnown RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 PYCR3Q53H96 274 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 BROXQ5VW32 411 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 LRRC66Q68CR7 880 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 TIGD7Q6NT04 549 aaPredicted RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF574Q6ZN55 896 aaPredicted RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 USP45Q70EL2 814 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 RAB11FIP2Q7L804 512 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 DTX1Q86Y01 620 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 MAP7D3Q8IWC1 876 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms