RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ANKMY2Q8IV38 441 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 OR4K2Q8NGD2 314 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 OR6P1Q8NGX9 317 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 CALML6Q8TD86 181 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 SNX19Q92543 992 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 FOXJ1Q92949 421 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 FAM131CQ96AQ9 280 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 PLEKHG4BQ96PX9 1271 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 CCDC77Q9BR77 488 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 GPR174Q9BXC1 333 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 COL25A1Q9BXS0 654 aaPredicted RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 EPC1Q9H2F5 836 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 EPHX3Q9H6B9 360 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 NLE1Q9NVX2 485 aaPredicted RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 TXNDC16Q9P2K2 825 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 SERGEFQ9UGK8 458 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 RAB21Q9UL25 225 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 ITM2BQ9Y287 266 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 FNDC3AQ9Y2H6 1198 aaKnown RBP10.94□□□□□ -0.66
VARS2-210ENST00000490699 SPO11Q9Y5K1 396 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 TEX264Q9Y6I9 313 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 FAM169AQ9Y6X4 670 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 TECTAO75443 2155 aa10.94□□□□□ -0.66
VARS2-210ENST00000490699 IGHV1OR15-9A0A0B4J2B8 117 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 GLYATL1P3A0A0U1RQE8 302 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CCDC151A5D8V7 595 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 MROH6A6NGR9 719 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 F8W8V4 182 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 K7ESF4 209 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CTIFO43310 598 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 FSBPO95073 299 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 AKT2P31751 481 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 SPINT3P49223 89 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 FNTBP49356 437 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CCR5P51681 352 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 PMS2P54278 862 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 DCDC1P59894 354 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 TMPRSS15P98073 1019 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 SEMG2Q02383 582 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 RPL6Q02878 288 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 ILF2Q12905 390 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 RALGDSQ12967 914 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 LONRF1Q17RB8 773 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 ZNF528Q3MIS6 628 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 FASTKD1Q53R41 847 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 HP1BP3Q5SSJ5 553 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 KIAA0895LQ68EN5 471 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 PDPK2PQ6A1A2 396 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 KIAA0930Q6ICG6 404 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 MRNIPQ6NTE8 343 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 ZC3H14Q6PJT7 736 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 CEP68Q76N32 757 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 ZNF765Q7L2R6 523 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 LPCAT2Q7L5N7 544 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CYP2U1Q7Z449 544 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 TMC3Q7Z5M5 1100 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 SDCCAG8Q86SQ7 713 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 RELL1Q8IUW5 271 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 LMNTD2Q8IXW0 634 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 GSPT2Q8IYD1 628 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 CBARPQ8N350 705 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 TTC30BQ8N4P2 665 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CADM4Q8NFZ8 388 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 GSDMBQ8TAX9 411 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 UBLCP1Q8WVY7 318 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 ULK4Q96C45 1275 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 AP2M1Q96CW1 435 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 DNAJC1Q96KC8 554 aaKnown RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 SIGLEC10Q96LC7 697 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 PRRX2Q99811 253 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 FAM167BQ9BTA0 163 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 ZSCAN5AQ9BUG6 496 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 SPATA16Q9BXB7 569 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 FAM83DQ9H4H8 585 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 BPIFA1Q9NP55 256 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 CHRAC1Q9NRG0 131 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 C20orf96Q9NUD7 363 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 NSMCE4AQ9NXX6 385 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 WSB2Q9NYS7 404 aaPredicted RBP10.93□□□□□ -0.66
VARS2-210ENST00000490699 DMTF1Q9Y222 760 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 VPS9D1Q9Y2B5 631 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 IKBKGQ9Y6K9 419 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 NCOR1O75376 2440 aa10.93□□□□□ -0.66
VARS2-210ENST00000490699 UQCRHLA0A096LP55 91 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 FAM86C2PA6NEL3 165 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 IGLON5A6NGN9 336 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 LDB2O43679 373 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 BUD23O43709 281 aaKnown RBP10.92□□□□□ -0.66
VARS2-210ENST00000490699 GPR37L1O60883 481 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 RECQL5O94762 991 aaPredicted RBP10.92□□□□□ -0.66
VARS2-210ENST00000490699 UQCRHP07919 91 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 C1SP09871 688 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 LHCGRP22888 699 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 PMLP29590 882 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 ACSL1P33121 698 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 ETV3P41162 512 aa10.92□□□□□ -0.66
VARS2-210ENST00000490699 ZNF140P52738 457 aaPredicted RBP10.92□□□□□ -0.66
VARS2-210ENST00000490699 TAS2R38P59533 333 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms