RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	TNF	P01375	233 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	PYGL	P06737	847 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	GIMD1	P0DJR0	217 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	MYCLP1	P12525	358 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	CKMT1A	P12532	417 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	ACP1	P24666	158 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TEAD1	P28347	426 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TNNT3	P45378	269 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	ATP5O	P48047	213 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	ACADVL	P49748	655 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	STC1	P52823	247 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	CDK18	Q07002	472 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	DPT	Q07507	201 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	GALNT3	Q14435	633 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	ELOC	Q15369	112 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	PCSK7	Q16549	785 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	QPCT	Q16769	361 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	RAET1G	Q6H3X3	334 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	RD3	Q7Z3Z2	195 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	KDELC2	Q7Z4H8	507 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TECPR1	Q7Z6L1	1165 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	HEATR4	Q86WZ0	1026 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	LRRC8A	Q8IWT6	810 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	NRSN1	Q8IZ57	195 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	GALNT15	Q8N3T1	639 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	FAM181A	Q8N9Y4	354 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	SPATA22	Q8NHS9	363 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	ACTL9	Q8TC94	416 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	CCHCR1	Q8TD31	782 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	SCG3	Q8WXD2	468 aa	Known RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TSACC	Q96A04	125 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TADA1	Q96BN2	335 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	AP2M1	Q96CW1	435 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	APOLD1	Q96LR9	279 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	SMIM14	Q96QK8	99 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	LRRC61	Q9BV99	259 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	TRHDE	Q9UKU6	1024 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	DOLK	Q9UPQ8	538 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	MSRB2	Q9Y3D2	182 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	DGKB	Q9Y6T7	804 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	PCNX2	A6NKB5	2137 aa		11.07	□□□□□ -0.64
GGA1-222	ENST00000489772	SPEG	Q15772	3267 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772		A0A0U1RQS6	177 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	C1orf232	A0A0U1RR37	186 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	RGSL1	A5PLK6	1076 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	GOLGA6L9	A6NEM1	432 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	TMEM202	A6NGA9	273 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	TNFRSF10C	O14798	259 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	PMPCB	O75439	489 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	GCAT	O75600	419 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	ZNF189	O75820	626 aa	Predicted RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	STK10	O94804	968 aa	Known RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	CLDN7	O95471	211 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	MT-CYB	P00156	380 aa	Predicted RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	ANXA6	P08133	673 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	CCDC175	P0C221	793 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	GPR1	P46091	355 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	DUSP3	P51452	185 aa	Predicted RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	EIF3E	P60228	445 aa	Known RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	OTUD4	Q01804	1114 aa	Known RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	C1orf61	Q13536	156 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	NOMO1	Q15155	1222 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	SMAD1	Q15797	465 aa	Known RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	DEFB133	Q30KQ1	61 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	FAM182A	Q5T1J6	154 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	DHRS13	Q6UX07	377 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	ZNF765	Q7L2R6	523 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	TMPRSS7	Q7RTY8	843 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	PID1	Q7Z2X4	250 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	NLRP8	Q86W28	1048 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	SPNS2	Q8IVW8	549 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	PELI3	Q8N2H9	469 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	SDR16C5	Q8N3Y7	309 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	UBE2Q2	Q8WVN8	375 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	GLMN	Q92990	594 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	TRIB3	Q96RU7	358 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	SRPK1	Q96SB4	655 aa	Known RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	HERPUD2	Q9BSE4	406 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	LGR4	Q9BXB1	951 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	TEX101	Q9BY14	249 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	UBP1	Q9NZI7	540 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	FAM153A	Q9UHL3	310 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	CD84	Q9UIB8	345 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	GUCA1B	Q9UMX6	200 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	CAPN6	Q9Y6Q1	641 aa		11.06	□□□□□ -0.64
GGA1-222	ENST00000489772	YY2	O15391	372 aa		11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	NDST3	O95803	873 aa		11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	NFKB1	P19838	968 aa		11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	RBL1	P28749	1068 aa		11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	CD68	P34810	354 aa	Predicted RBP	11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	RPIA	P49247	311 aa		11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	CDK3	Q00526	305 aa		11.05	□□□□□ -0.64
GGA1-222	ENST00000489772	E2F1	Q01094	437 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms