RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
SF3A1-208ENST00000485618 BRSK1Q8TDC3 778 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 SLCO2A1Q92959 643 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 AP2M1Q96CW1 435 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 NUS1Q96E22 293 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 OXNAD1Q96HP4 312 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-208ENST00000485618 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 TRIB3Q96RU7 358 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 FICDQ9BVA6 458 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 FAM83DQ9H4H8 585 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 ERVMER34-1Q9H9K5 563 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 ETNK1Q9HBU6 452 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 ARNT2Q9HBZ2 717 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 TM9SF3Q9HD45 589 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 CD93Q9NPY3 652 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 GDF3Q9NR23 364 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 PHPT1Q9NRX4 125 aaPredicted RBP8.27□□□□□ -1.09
SF3A1-208ENST00000485618 BFARQ9NZS9 450 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 ASIC3Q9UHC3 531 aa8.27□□□□□ -1.09
SF3A1-208ENST00000485618 NUMA1Q14980 2115 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 MAGEB16A2A368 324 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 FAM187AA6NFU0 413 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 NPIPB15A6NHN6 443 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 F8W8V4 182 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 SUN1O94901 812 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 METTL18O95568 372 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 AGTP01019 485 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 HOXC4P09017 264 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ALPIP09923 528 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 HOXB3P14651 431 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 LPOP22079 712 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 TEAD1P28347 426 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 HMGCLP35914 325 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 PPARGP37231 505 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 HADHAP40939 763 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 GPR1P46091 355 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 SPINT3P49223 89 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 STC1P52823 247 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 GDF10P55107 478 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 PPP2CBP62714 309 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 PPP2CAP67775 309 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 MTM1Q13496 603 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 TAF1AQ15573 450 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 SKIDA1Q1XH10 827 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 LRRC73Q5JTD7 316 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 PDPK2PQ6A1A2 396 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 KYAT3Q6YP21 454 aaKnown RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 Q6ZSR6 202 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 GLT6D1Q7Z4J2 308 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 TMC3Q7Z5M5 1100 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ABI3BPQ7Z7G0 1075 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ZSWIM9Q86XI8 627 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 KLHL7Q8IXQ5 586 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 CEP112Q8N8E3 955 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 SPATA4Q8NEY3 305 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 GABPB2Q8TAK5 448 aaPredicted RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 BLOC1S5Q8TDH9 187 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 BTN2A2Q8WVV5 523 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 KLK6Q92876 244 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 DTD2Q96FN9 168 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 COQ10AQ96MF6 247 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 TTC1Q99614 292 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ZSCAN5AQ9BUG6 496 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 RAB17Q9H0T7 212 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 XAB2Q9HCS7 855 aaKnown RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 SAMD15Q9P1V8 674 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 APPL1Q9UKG1 709 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ZFR2Q9UPR6 939 aaKnown RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ITM2BQ9Y287 266 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ANKRD6Q9Y2G4 727 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 UTP11Q9Y3A2 253 aaKnown RBP8.26□□□□□ -1.09
SF3A1-208ENST00000485618 ZNF711Q9Y462 761 aa8.26□□□□□ -1.09
SF3A1-208ENST00000485618 KNL1Q8NG31 2342 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 EML5Q05BV3 1969 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 LNP1A1A4G5 178 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 HEATR9A2RTY3 570 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 CTAGE15A4D2H0 777 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 NEMP2A6NFY4 417 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 F5H423 210 aaPredicted RBP8.25□□□□□ -1.09
SF3A1-208ENST00000485618 H3BM21 787 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 PFDN6O15212 129 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 CLDN7O95471 211 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 PRKCGP05129 697 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 ZSCAN5DPP0CG00 497 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 CTAGE8P0CG41 777 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 THEGLP0DJG4 465 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 MLNP12872 115 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 ITIH2P19823 946 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 TPSB2P20231 275 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 ADRA1DP25100 572 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 ADRA1AP35348 466 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 CSNK1EP49674 416 aaKnown RBP8.25□□□□□ -1.09
SF3A1-208ENST00000485618 VPS41P49754 854 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 DCDC1P59894 354 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 TUBB4BP68371 445 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 PTSQ03393 145 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 FOXC1Q12948 553 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 RALGDSQ12967 914 aa8.25□□□□□ -1.09
SF3A1-208ENST00000485618 CALCOCO2Q13137 446 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms