RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PDCLQ13371 301 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 PEX6Q13608 980 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 IL10RAQ13651 578 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 IL11RAQ14626 422 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 RABEP1Q15276 862 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 MIIPQ5JXC2 388 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 LEKR1Q6ZMV7 388 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 DRC7Q8IY82 874 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 GUF1Q8N442 669 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 SFRP1Q8N474 314 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 SLC37A2Q8TED4 501 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 UBE2Q2Q8WVN8 375 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF606Q8WXB4 792 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 PGAP3Q96FM1 320 aaPredicted RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 NPY6RQ99463 290 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 FRMD8Q9BZ67 464 aaPredicted RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 ZYG11BQ9C0D3 744 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 BRD8Q9H0E9 1235 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 SUV39H2Q9H5I1 410 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 SUDS3Q9H7L9 328 aaPredicted RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 METTL14Q9HCE5 456 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 NDFIP2Q9NV92 336 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 PPARGC1AQ9UBK2 798 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 SERTAD1Q9UHV2 236 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 SUFUQ9UMX1 484 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 CNTN6Q9UQ52 1028 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 B3GNT3Q9Y2A9 372 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 NTNG1Q9Y2I2 539 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 PLEKHM1Q9Y4G2 1056 aa7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 COPG1Q9Y678 874 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF106Q9H2Y7 1883 aaKnown RBP7.3□□□□□ -1.24
SPTLC1-205ENST00000477888 TEX33O43247 280 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ACTN4O43707 911 aaKnown RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 KDELR3O43731 214 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 PRICKLE3O43900 615 aaPredicted RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SPAG6O75602 509 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 FAM155BO75949 473 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 PIGNO95427 931 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 EML2O95834 649 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 MT-ND3P03897 115 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 EPB41P11171 864 aaKnown RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 FGF5P12034 268 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 BPIP17213 487 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ETFBP38117 255 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ACTR1BP42025 376 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 PTGIRP43119 386 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 GNPDA1P46926 289 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ACTR1AP61163 376 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 RPS18P62269 152 aaKnown RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SH3BP2P78314 561 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 RALGDSQ12967 914 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 INO80DQ53TQ3 878 aaPredicted RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 TCERG1LQ5VWI1 586 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 AFMIDQ63HM1 303 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ERAP2Q6P179 960 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 OLFML1Q6UWY5 402 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 LIPIQ6XZB0 460 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SYVN1Q86TM6 617 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 NLRP14Q86W24 1093 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ZSWIM9Q86XI8 627 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 PPM1KQ8N3J5 372 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 GLIS1Q8NBF1 620 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 NETO2Q8NC67 525 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF397Q8NF99 534 aaPredicted RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 LMO3Q8TAP4 145 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ADAMTS17Q8TE56 1095 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 INPP5DQ92835 1189 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SLC35C1Q96A29 364 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SCARF2Q96GP6 870 aaPredicted RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 OR6C1Q96RD1 312 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 CPXM1Q96SM3 734 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 TEX101Q9BY14 249 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SARS2Q9NP81 518 aaKnown RBP7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 TMEM63CQ9P1W3 806 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 KLHL3Q9UH77 587 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 OSGIN2Q9Y236 505 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 SLC17A4Q9Y2C5 497 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 ATP8A1Q9Y2Q0 1164 aa7.29□□□□□ -1.24
SPTLC1-205ENST00000477888 MN1Q10571 1320 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 PCSK5Q92824 1860 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 TNRC6AQ8NDV7 1962 aaKnown RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 A6NL46 340 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 CETN3O15182 167 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ZNF185O15231 689 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 PMM2O15305 246 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 DAB1O75553 588 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 TMCC1O94876 653 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 IGSF6O95976 241 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 F9P00740 461 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 C9P02748 559 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 IVLP07476 585 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 SNRPB2P08579 225 aaKnown RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 STSP08842 583 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 CAPN3P20807 821 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 ERCC5P28715 1186 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 POLD2P49005 469 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 PPM1FP49593 454 aaPredicted RBP7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 SLC6A3Q01959 620 aa7.28□□□□□ -1.24
SPTLC1-205ENST00000477888 GCNT1Q02742 428 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms