RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 HERPUD2Q9BSE4 406 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 DESI2Q9BSY9 194 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 TEX101Q9BY14 249 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 USP29Q9HBJ7 922 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 KCTD5Q9NXV2 234 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 RPL26L1Q9UNX3 145 aaKnown RBP21.14■□□□□ 0.97
LIME1-204ENST00000476183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.14■□□□□ 0.97
LIME1-204ENST00000476183 CELSR3Q9NYQ7 3312 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 LAMA5O15230 3695 aa21.14■□□□□ 0.97
LIME1-204ENST00000476183 GRID2IPA4D2P6 1211 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 CLDN7O95471 211 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 SOD1P00441 154 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 ANXA6P08133 673 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 CTSEP14091 401 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 JUPP14923 745 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 ZNF30P17039 623 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 STC1P52823 247 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 WASHC5Q12768 1159 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 ELOCQ15369 112 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 PPP2R5EQ16537 467 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 CDKN3Q16667 212 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 TEX44Q53QW1 395 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 C6orf132Q5T0Z8 1188 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 GUSBP11Q6P575 273 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 BZW1Q7L1Q6 419 aaKnown RBP21.13■□□□□ 0.97
LIME1-204ENST00000476183 NT5DC3Q86UY8 548 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 SLC35F3Q8IY50 421 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 TFB1MQ8WVM0 346 aaKnown RBP21.13■□□□□ 0.97
LIME1-204ENST00000476183 TADA1Q96BN2 335 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 CALR3Q96L12 384 aaKnown RBP21.13■□□□□ 0.97
LIME1-204ENST00000476183 TRIB3Q96RU7 358 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 LYSMD1Q96S90 227 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 HEMGNQ9BXL5 484 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 SLC25A51Q9H1U9 297 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 ABCG8Q9H221 673 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 TRIM10Q9UDY6 481 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 PCDHA3Q9Y5H8 950 aa21.13■□□□□ 0.97
LIME1-204ENST00000476183 GOLGA6CA6NDK9 693 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 GOLGA6BA6NDN3 693 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 TRABD2BA6NFA1 517 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 ANKRD66B4E2M5 251 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 TAF4O00268 1085 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 TNFRSF10CO14798 259 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 TNFP01375 233 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 GOLGA6DP0CG33 693 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 MYCLP1P12525 358 aaPredicted RBP21.12■□□□□ 0.97
LIME1-204ENST00000476183 DUSP3P51452 185 aaPredicted RBP21.12■□□□□ 0.97
LIME1-204ENST00000476183 CDK3Q00526 305 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 E2F1Q01094 437 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 DPTQ07507 201 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 TARDBPQ13148 414 aaKnown RBP eCLIP21.12■□□□□ 0.97
LIME1-204ENST00000476183 GALNT3Q14435 633 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 RAET1GQ6H3X3 334 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 KIAA1328Q86T90 577 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 ZC3H18Q86VM9 953 aaKnown RBP21.12■□□□□ 0.97
LIME1-204ENST00000476183 SPATA22Q8NHS9 363 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 MDM1Q8TC05 714 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 IFI44Q8TCB0 444 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 PTCD2Q8WV60 388 aaKnown RBP21.12■□□□□ 0.97
LIME1-204ENST00000476183 P3H4Q92791 437 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 SCAMP4Q969E2 229 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 TEKT5Q96M29 485 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 GLOD4Q9HC38 313 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 PHPT1Q9NRX4 125 aaPredicted RBP21.12■□□□□ 0.97
LIME1-204ENST00000476183 GOLGA6AQ9NYA3 693 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 PKD1L2Q7Z442 2459 aa21.12■□□□□ 0.97
LIME1-204ENST00000476183 OPA1O60313 960 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 MT-CYBP00156 380 aaPredicted RBP21.11■□□□□ 0.97
LIME1-204ENST00000476183 FUCA1P04066 466 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 CEACAM5P06731 702 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 GP1BAP07359 652 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 KELP23276 732 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 CTNNA2P26232 953 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 TEAD1P28347 426 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 CD68P34810 354 aaPredicted RBP21.11■□□□□ 0.97
LIME1-204ENST00000476183 NR0B2Q15466 257 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 BBS12Q6ZW61 710 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 EFL1Q7Z2Z2 1120 aaKnown RBP21.11■□□□□ 0.97
LIME1-204ENST00000476183 KDELC2Q7Z4H8 507 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 KIAA1524Q8TCG1 905 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 ALG3Q92685 438 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 AP2M1Q96CW1 435 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 AGAP2Q99490 1192 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 MLPHQ9BV36 600 aaPredicted RBP21.11■□□□□ 0.97
LIME1-204ENST00000476183 FRMD8Q9BZ67 464 aaPredicted RBP21.11■□□□□ 0.97
LIME1-204ENST00000476183 TMEM168Q9H0V1 697 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 CYP4F12Q9HCS2 524 aa21.11■□□□□ 0.97
LIME1-204ENST00000476183 ARHGEF17Q96PE2 2063 aaPredicted RBP21.1■□□□□ 0.97
LIME1-204ENST00000476183 PRSS38A1L453 326 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 CPED1A4D0V7 1026 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 EME2A4GXA9 379 aaPredicted RBP21.1■□□□□ 0.97
LIME1-204ENST00000476183 PCSK7Q16549 785 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 PERM1Q5SV97 790 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 LVRNQ6Q4G3 990 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 ZNF765Q7L2R6 523 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 CCL4L1Q8NHW4 92 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 QKIQ96PU8 341 aaKnown RBP eCLIP21.1■□□□□ 0.97
LIME1-204ENST00000476183 WDR24Q96S15 920 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 NCKIPSDQ9NZQ3 722 aa21.1■□□□□ 0.97
LIME1-204ENST00000476183 SIRPGQ9P1W8 387 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms