RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PHF13Q86YI8 300 aaPredicted RBP10.48□□□□□ -0.73
CALD1-217ENST00000475772 SLITRK4Q8IW52 837 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 Q8N9G6 341 aaPredicted RBP10.48□□□□□ -0.73
CALD1-217ENST00000475772 HTR3CQ8WXA8 447 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 SGF29Q96ES7 293 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 WDR92Q96MX6 357 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 C1QTNF7Q9BXJ2 289 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 SLC39A8Q9C0K1 460 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 TMEM168Q9H0V1 697 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 CLSTN2Q9H4D0 955 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 FGF22Q9HCT0 170 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 NLRC4Q9NPP4 1024 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 ADAM22Q9P0K1 906 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 FOXJ2Q9P0K8 574 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 KLQ9UEF7 1012 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 PISDQ9UG56 409 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 LOXL2Q9Y4K0 774 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 RNF215Q9Y6U7 377 aa10.48□□□□□ -0.73
CALD1-217ENST00000475772 CFAP69A5D8W1 941 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 TMX2-CTNND1H3BSU7 103 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 PES1O00541 588 aaKnown RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 PRAMEF11O60813 436 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 RECQL5O94762 991 aaPredicted RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 LIPCP11150 499 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 PNLIPP16233 465 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 GLB1P16278 677 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 HTR1BP28222 390 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 MMP12P39900 470 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 NAA30Q147X3 362 aaPredicted RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 CA9Q16790 459 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 CLEC16AQ2KHT3 1053 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 PARP15Q460N3 678 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 CERCAMQ5T4B2 595 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 SCYL2Q6P3W7 929 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 USP53Q70EK8 1073 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 MON1BQ7L1V2 547 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 SPRED1Q7Z699 444 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 C17orf82Q86X59 251 aaPredicted RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 NRROSQ86YC3 692 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 JAMLQ86YT9 394 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 CCNJLQ8IV13 435 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 ARFGAP1Q8N6T3 406 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 C3orf20Q8ND61 904 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 FAM46DQ8NEK8 389 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 OR6C4Q8NGE1 309 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 USP7Q93009 1102 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 ECHDC3Q96DC8 303 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 CELF6Q96J87 481 aaKnown RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 ZNF641Q96N77 438 aaPredicted RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 TMEM74Q96NL1 305 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 SELENOOQ9BVL4 669 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 STRADBQ9C0K7 418 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 VPS16Q9H269 839 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 SEMA6CQ9H3T2 930 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 SPATS2LQ9NUQ6 558 aaKnown RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 LRIT1Q9P2V4 623 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 UBA2Q9UBT2 640 aaPredicted RBP10.47□□□□□ -0.73
CALD1-217ENST00000475772 IL17BQ9UHF5 180 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 SIK3Q9Y2K2 1263 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 ATP8A1Q9Y2Q0 1164 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 ST14Q9Y5Y6 855 aa10.47□□□□□ -0.73
CALD1-217ENST00000475772 TRAFD1O14545 582 aaPredicted RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 SUV39H1O43463 412 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 HOXC4P09017 264 aaPredicted RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 CCL4P13236 92 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 XPAP23025 273 aaPredicted RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 EEF1GP26641 437 aaKnown RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 CSNK1DP48730 415 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 CSRP3P50461 194 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 PAPOLAP51003 745 aaKnown RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 ZNF143P52747 638 aaPredicted RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 KIAA1024LP59773 190 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 CYP4F2P78329 520 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 C16orf72Q14CZ0 275 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 KRT31Q15323 416 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 TBR1Q16650 682 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 C14orf28Q4W4Y0 310 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 CDKAL1Q5VV42 579 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 AFMIDQ63HM1 303 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 BRAT1Q6PJG6 821 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 XKR5Q6UX68 686 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 TRIM72Q6ZMU5 477 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 ARHGAP36Q6ZRI8 547 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 TAF8Q7Z7C8 310 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 SRLQ86TD4 932 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 VASH2Q86V25 355 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 ARHGAP12Q8IWW6 846 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 TP53INP2Q8IXH6 220 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 CBARPQ8N350 705 aaPredicted RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 SVOPQ8N4V2 548 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 OR56A4Q8NGH8 313 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 CATSPERBQ9H7T0 1116 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 FAM207AQ9NSI2 230 aaPredicted RBP10.46□□□□□ -0.73
CALD1-217ENST00000475772 GPATCH2LQ9NWQ4 482 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 SEPT3Q9UH03 358 aa10.46□□□□□ -0.73
CALD1-217ENST00000475772 UBR5O95071 2799 aaPredicted RBP10.46□□□□□ -0.74
CALD1-217ENST00000475772 NBPF19A0A087WUL8 3843 aa10.45□□□□□ -0.74
CALD1-217ENST00000475772 A8MX80 341 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms