RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PRNPP04156 253 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 GSTA1P08263 222 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 CYP2A6P11509 494 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-210ENST00000475329 BMP1P13497 986 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 PMLP29590 882 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 FOXN2P32314 431 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 STC1P52823 247 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 SLC12A2P55011 1212 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 POU4F1Q01851 419 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 E2F5Q15329 346 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 ZNF805Q5CZA5 627 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
TRAF4-210ENST00000475329 SERPINA13PQ6UXR4 307 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 SFTPA1Q8IWL2 248 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
TRAF4-210ENST00000475329 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 ZNF366Q8N895 744 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 HCAR2Q8TDS4 363 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 OR8D1Q8WZ84 308 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.72□□□□□ -0.218e-6■■■□□ 18.3
TRAF4-210ENST00000475329 CHFRQ96EP1 664 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 TSPAN17Q96FV3 270 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 MAGEB18Q96M61 343 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 FAM111AQ96PZ2 611 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 TCF12Q99081 682 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 VPS11Q9H270 941 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 CAB39LQ9H9S4 337 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 DKK3Q9UBP4 350 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 DCDC2Q9UHG0 476 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 GRID1Q9ULK0 1009 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 VPS9D1Q9Y2B5 631 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 PLLPQ9Y342 182 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 A0A096LPK6 155 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 A0A0U1RQS6 177 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 GMNCA6NCL1 334 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CLDN7O95471 211 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CTSLP07711 333 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 DHRS4L1P0CG22 281 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 HLA-EP13747 358 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 STMN1P16949 149 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 SAT1P21673 171 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 XPAP23025 273 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CRABP2P29373 138 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 VIPR1P32241 457 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 RAB10P61026 200 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CACNG1Q06432 222 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 PEX6Q13608 980 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 SEMA3AQ14563 771 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CDKN3Q16667 212 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 INSCQ1MX18 579 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 ZRANB3Q5FWF4 1079 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 RBM20Q5T481 1227 aaKnown RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 RNF187Q5TA31 235 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CRTC1Q6UUV9 634 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 KYAT3Q6YP21 454 aaKnown RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CDHR3Q6ZTQ4 885 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 RAPH1Q70E73 1250 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 LDB1Q86U70 411 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 TSPAN33Q86UF1 283 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 STK40Q8N2I9 435 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 ACVR1CQ8NER5 493 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 PBXIP1Q96AQ6 731 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 CHMP6Q96FZ7 201 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 LRCH3Q96II8 777 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 TSNARE1Q96NA8 513 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 TMEM245Q9H330 911 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 C12orf65Q9H3J6 166 aaKnown RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 UBE2ZQ9H832 354 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 THAP10Q9P2Z0 257 aaPredicted RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 TLK1Q9UKI8 766 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 FNDC3AQ9Y2H6 1198 aaKnown RBP13.71□□□□□ -0.21
TRAF4-210ENST00000475329 SLC30A1Q9Y6M5 507 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 LAMA3Q16787 3333 aa13.71□□□□□ -0.21
TRAF4-210ENST00000475329 C2CD4DB7Z1M9 353 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 MBTPS2O43462 519 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 NDUFS3O75489 264 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 C2P06681 752 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 ZNF30P17039 623 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 ITGALP20701 1170 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 KCNA5P22460 613 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 SPAM1P38567 509 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 ETV4P43268 484 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 SOX9P48436 509 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 TTPAP49638 278 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 CSRP3P50461 194 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 SEC24CP53992 1094 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 PTPN5P54829 565 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 XIAPP98170 497 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
TRAF4-210ENST00000475329 ZKSCAN8Q15776 578 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-210ENST00000475329 PDK4Q16654 411 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 AAK1Q2M2I8 961 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 PPM1JQ5JR12 505 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 C9orf64Q5T6V5 341 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 N4BP2L1Q5TBK1 243 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-210ENST00000475329 HECTD2Q5U5R9 776 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 LRRC66Q68CR7 880 aa13.7□□□□□ -0.22
TRAF4-210ENST00000475329 FAM45BPQ6NSW5 357 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms