RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SEMA5AQ13591 1074 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 SLC1A5Q15758 541 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 CNGA3Q16281 694 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF423Q2M1K9 1284 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 SPDYCQ5MJ68 293 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TPRG1LQ5T0D9 272 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ANKRD22Q5VYY1 191 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3GQ6DHY5 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ITPRIPL1Q6GPH6 555 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3CQ6IPX1 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 NEK5Q6P3R8 708 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 LAYNQ6UX15 382 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 SLC36A4Q6YBV0 504 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ARHGEF18Q6ZSZ5 1173 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF534Q76KX8 674 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 HSD11B1LQ7Z5J1 315 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 MARCH9Q86YJ5 346 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 KLHL7Q8IXQ5 586 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3Q8IZP1 549 aaPredicted RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 TTC30BQ8N4P2 665 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 SLC25A41Q8N5S1 370 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 PDCD7Q8N8D1 485 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 TMEM145Q8NBT3 493 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 LSM14AQ8ND56 463 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 LRRN4CLQ8ND94 238 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 LPCAT1Q8NF37 534 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 IPMKQ8NFU5 416 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 CENPTQ96BT3 561 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 SPACA7Q96KW9 195 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 COQ10AQ96MF6 247 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 WRAP53Q9BUR4 548 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 FICDQ9BVA6 458 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 PCED1AQ9H1Q7 454 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 KDM4CQ9H3R0 1056 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 PRORYQ9H606 182 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ARNT2Q9HBZ2 717 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 PREBQ9HCU5 417 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 DYRK4Q9NR20 520 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 PIH1D1Q9NWS0 290 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 RNF14Q9UBS8 474 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 EIF2B4Q9UI10 523 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 PILRBQ9UKJ0 227 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 NCKAP1Q9Y2A7 1128 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 COQ6Q9Y2Z9 468 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 MRFAP1Q9Y605 127 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ZFC3H1O60293 1989 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 RP1P56715 2156 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF106Q9H2Y7 1883 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 A0A1W2PPC4 97 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 CAPN8A6NHC0 703 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 GOLGA8CPA6NN73 597 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 ESPNB1AK53 854 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 H0Y8X5 98 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 K7ESM1 405 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 KIF2AO00139 706 aaPredicted RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 SLC31A1O15431 190 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TTI1O43156 1089 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 NDUFS2O75306 463 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 ANXA9O76027 345 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 URI1O94763 535 aaPredicted RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 STK10O94804 968 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 RHOBTB1O94844 696 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TMEM63AO94886 807 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 SUN1O94901 812 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 FSBPO95073 299 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 PCDH8O95206 1070 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 CLDN7O95471 211 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 AP2A1O95782 977 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 KRT14P02533 472 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TUBB4AP04350 444 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 C1SP09871 688 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 C6P13671 934 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 CD27P26842 260 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 VIPR1P32241 457 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 DHPSP49366 369 aaPredicted RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 VPS41P49754 854 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 SUOXP51687 545 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 STC1P52823 247 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 GEMP55040 296 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 POLR2LP62875 67 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 RPS21P63220 83 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 C2orf54Q08AI8 447 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 SFSWAPQ12872 951 aaKnown RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 KCNJ11Q14654 390 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 PTPRCAPQ14761 206 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 AGERQ15109 404 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TRADDQ15628 312 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 ELF2Q15723 593 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 WSCD2Q2TBF2 565 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 LRRC66Q68CR7 880 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 Q6ZVL8 140 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 LPCAT2Q7L5N7 544 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 TECPR1Q7Z6L1 1165 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 AGGF1Q8N302 714 aaeCLIP6.99□□□□□ -1.29
LIMD1-204ENST00000474665 CCDC89Q8N998 374 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 CPT1BQ92523 772 aa6.99□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms