RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TNFRSF8P28908 595 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 AKT2P31751 481 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 SPAM1P38567 509 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 ELK3P41970 407 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 MAGEA3P43357 314 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 SPINT3P49223 89 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 TMPRSS15P98073 1019 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 LRRC14Q15048 493 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 CDKN3Q16667 212 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 MAP9Q49MG5 647 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 SPDYCQ5MJ68 293 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 WDR45BQ5MNZ6 344 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 SEL1L3Q68CR1 1132 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 WDR93Q6P2C0 686 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 CYP2U1Q7Z449 544 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 HSD11B1LQ7Z5J1 315 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 KMT2EQ8IZD2 1858 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 CBARPQ8N350 705 aaPredicted RBP16.83■□□□□ 0.28
CCM2-205ENST00000472223 TTC30BQ8N4P2 665 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 AP2M1Q96CW1 435 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 SIGLEC10Q96LC7 697 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 TTC1Q99614 292 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 LRFN3Q9BTN0 628 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 KIFC1Q9BW19 673 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 C1QTNF2Q9BXJ5 285 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 IRF2BPLQ9H1B7 796 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 C6orf106Q9H6K1 298 aaPredicted RBP16.83■□□□□ 0.28
CCM2-205ENST00000472223 BPIFA1Q9NP55 256 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 NLE1Q9NVX2 485 aaPredicted RBP16.83■□□□□ 0.28
CCM2-205ENST00000472223 IL17CQ9P0M4 197 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 DMTF1Q9Y222 760 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 FNDC3AQ9Y2H6 1198 aaKnown RBP16.83■□□□□ 0.28
CCM2-205ENST00000472223 SLC30A1Q9Y6M5 507 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 RPS6KL1Q9Y6S9 549 aa16.83■□□□□ 0.28
CCM2-205ENST00000472223 PLXND1Q9Y4D7 1925 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 METTL12A8MUP2 240 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 SPINT1O43278 529 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 BUD23O43709 281 aaKnown RBP16.82■□□□□ 0.28
CCM2-205ENST00000472223 C1SP09871 688 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 ETV3P41162 512 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 MAGEA4P43358 317 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 MSLNQ13421 630 aaPredicted RBP16.82■□□□□ 0.28
CCM2-205ENST00000472223 SPANXN3Q5MJ09 141 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 HP1BP3Q5SSJ5 553 aaPredicted RBP16.82■□□□□ 0.28
CCM2-205ENST00000472223 CCNI2Q6ZMN8 369 aaPredicted RBP16.82■□□□□ 0.28
CCM2-205ENST00000472223 Q6ZVL8 140 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 ZNF765Q7L2R6 523 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 ANKMY2Q8IV38 441 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 RGL4Q8IZJ4 473 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 FRMD1Q8N878 549 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 FBXO36Q8NEA4 188 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 OR6P1Q8NGX9 317 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 KLK6Q92876 244 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCM2-205ENST00000472223 ZNF669Q96BR6 464 aaPredicted RBP16.82■□□□□ 0.28
CCM2-205ENST00000472223 DTD2Q96FN9 168 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 CFAP36Q96G28 342 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 COQ10AQ96MF6 247 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 PWWP2AQ96N64 755 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 TTC25Q96NG3 672 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 PLEKHG4BQ96PX9 1271 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 SPATA16Q9BXB7 569 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 EPC1Q9H2F5 836 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 CHMP2BQ9UQN3 213 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 COQ6Q9Y2Z9 468 aa16.82■□□□□ 0.28
CCM2-205ENST00000472223 MUC3AQ02505 3323 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 GLYATL1P3A0A0U1RQE8 302 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 E7ESA3 106 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 PRAMEF26H0Y7S4 382 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 FPGTO14772 594 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 PFDN6O15212 129 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 TP73O15350 636 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 SLC31A1O15431 190 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 USP1O94782 785 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 GSTA2P09210 222 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 HNRNPA2B1P22626 353 aaKnown RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 PHBP35232 272 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 PPARGP37231 505 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 ZNF140P52738 457 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 ITGA9Q13797 1035 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 SIM2Q14190 667 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 STAT4Q14765 748 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 AGERQ15109 404 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 TMEM259Q4ZIN3 620 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 ALS2CLQ60I27 953 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 NLRP8Q86W28 1048 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 TMEFF1Q8IYR6 380 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 MPP5Q8N3R9 675 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 DEFB119Q8N690 84 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 DENND6BQ8NEG7 585 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 BIRC7Q96CA5 298 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 LENG8Q96PV6 779 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 ZSCAN5AQ9BUG6 496 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 PARD6BQ9BYG5 372 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 DUSP15Q9H1R2 295 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 CD84Q9UIB8 345 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 MBD1Q9UIS9 605 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 RAB23Q9ULC3 237 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms