RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 AP2M1Q96CW1 435 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 AGAP2Q99490 1192 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 MLPHQ9BV36 600 aaPredicted RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 TEX101Q9BY14 249 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 BRD8Q9H0E9 1235 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 ABCG4Q9H172 646 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 CCDC86Q9H6F5 360 aaKnown RBP11.53□□□□□ -0.56
CDHR3-205ENST00000468143 UBP1Q9NZI7 540 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 IMPACTQ9P2X3 320 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 PCDHA3Q9Y5H8 950 aa11.53□□□□□ -0.56
CDHR3-205ENST00000468143 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TMEM8BA6NDV4 472 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 ANKRD66B4E2M5 251 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 INPP4BO15327 924 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 OPA1O60313 960 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 MT-CYBP00156 380 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 FUCA1P04066 466 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CAPNS1P04632 268 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 HOXC4P09017 264 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 PIRTP0C851 137 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TGM2P21980 687 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 KELP23276 732 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 PTPN3P26045 913 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CDC25BP30305 580 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CTNNA1P35221 906 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 GPR1P46091 355 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 NR2C2P49116 596 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CDK3Q00526 305 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 WASHC5Q12768 1159 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 PRKD1Q15139 912 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TEX44Q53QW1 395 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 PERM1Q5SV97 790 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 DOK6Q6PKX4 331 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 BZW1Q7L1Q6 419 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TAF8Q7Z7C8 310 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 GKN2Q86XP6 184 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 SFTPA2Q8IWL1 248 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 FSTL5Q8N475 847 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 KIAA1524Q8TCG1 905 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 MAPK15Q8TD08 544 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 SCG3Q8WXD2 468 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 GLMNQ92990 594 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 IMP4Q96G21 291 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 RBM41Q96IZ5 413 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TBATAQ96M53 351 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 RIOK2Q9BVS4 552 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 BOCQ9BWV1 1114 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TMEM168Q9H0V1 697 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CARS2Q9HA77 564 aaKnown RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 GLOD4Q9HC38 313 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 PHPT1Q9NRX4 125 aaPredicted RBP11.52□□□□□ -0.57
CDHR3-205ENST00000468143 PADI4Q9UM07 663 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 GPR34Q9UPC5 381 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CLCA2Q9UQC9 943 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 TMEM98Q9Y2Y6 226 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.57
CDHR3-205ENST00000468143 SHROOM3Q8TF72 1996 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 C1orf232A0A0U1RR37 186 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PRSS38A1L453 326 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 GRID2IPA4D2P6 1211 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 SRRM3A6NNA2 597 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 BTNL10A8MVZ5 291 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PDE2AO00408 941 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 TNFRSF10CO14798 259 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PJA2O43164 708 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PMPCBO75439 489 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 SOD1P00441 154 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 CEACAM5P06731 702 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 ZNF30P17039 623 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 NFKB1P19838 968 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 CD68P34810 354 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 GNPDA1P46926 289 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 RPIAP49247 311 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 STC1P52823 247 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 RPL26P61254 145 aaKnown RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 CDK18Q07002 472 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 CCDC181Q5TID7 509 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 MARK2Q7KZI7 788 aaKnown RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PID1Q7Z2X4 250 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 TRIM74Q86UV6 250 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PDCD7Q8N8D1 485 aaKnown RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 KYQ8NBH2 561 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 FAM46DQ8NEK8 389 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 TEKT5Q96M29 485 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 TRIB3Q96RU7 358 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 WDR24Q96S15 920 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 FAM118BQ9BPY3 351 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 ADGRE3Q9BY15 652 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 SLC25A51Q9H1U9 297 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 USP29Q9HBJ7 922 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 EVA1BQ9NVM1 165 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 KCTD5Q9NXV2 234 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 PACSIN2Q9UNF0 486 aaPredicted RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 RPL26L1Q9UNX3 145 aaKnown RBP11.51□□□□□ -0.57
CDHR3-205ENST00000468143 SHOC2Q9UQ13 582 aa11.51□□□□□ -0.57
CDHR3-205ENST00000468143 AK5Q9Y6K8 562 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms