RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 IZUMO3Q5VZ72 239 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 KCTD11Q693B1 232 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GTF2IRD2BQ6EKJ0 949 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ITPRIPL1Q6GPH6 555 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 CXorf57Q6NSI4 855 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 RPTNQ6XPR3 784 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 TRMT10CQ7L0Y3 403 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 GTF2IRD2Q86UP8 949 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 CCDC103Q8IW40 242 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 MFSD6LQ8IWD5 586 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 BBS7Q8IWZ6 715 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ZNF567Q8N184 647 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 BBS5Q8N3I7 341 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ZCCHC9Q8N567 271 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 ATPAF2Q8N5M1 289 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 C12orf76Q8N812 135 aaPredicted RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 CNTD1Q8N815 330 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 DCAF4L2Q8NA75 395 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GLIS1Q8NBF1 620 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 CCNYQ8ND76 341 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ITFG1Q8TB96 612 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 FBXO25Q8TCJ0 367 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 FRS2Q8WU20 508 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 DEPDC1BQ8WUY9 529 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 NSMCE1Q8WV22 266 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 OSCP1Q8WVF1 389 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 BTN2A2Q8WVV5 523 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 CPT1BQ92523 772 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 SUSD6Q92537 303 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 PPP1R14AQ96A00 147 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ELSPBP1Q96BH3 223 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 MYEOVQ96EZ4 313 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ZSWIM3Q96MP5 696 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 FMO2Q99518 471 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 LGMNQ99538 433 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 TRIM51Q9BSJ1 452 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 FUT8Q9BYC5 575 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 SLC25A51Q9H1U9 297 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ARNT2Q9HBZ2 717 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 ZFP14Q9HCL3 533 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 TRPV5Q9NQA5 729 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 SPHK2Q9NRA0 654 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 VPS45Q9NRW7 570 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 THG1LQ9NWX6 298 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 SMPD4Q9NXE4 827 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GOLGA6AQ9NYA3 693 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 EPS15L1Q9UBC2 864 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 GULP1Q9UBP9 304 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.56□□□□□ -1.52
VPS41-211ENST00000466017 ANAPC5Q9UJX4 755 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 HPCAL4Q9UM19 191 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 NFU1Q9UMS0 254 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 SLC27A6Q9Y2P4 619 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 AAR2Q9Y312 384 aaKnown RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 MFHAS1Q9Y4C4 1052 aa5.56□□□□□ -1.52
VPS41-211ENST00000466017 V9GYY5 206 aaPredicted RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 NUP210Q8TEM1 1887 aaPredicted RBP5.56□□□□□ -1.52
VPS41-211ENST00000466017 HELZP42694 1942 aaKnown RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 MAGEB16A2A368 324 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 C7orf72A4D263 438 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 HEPACAM2A8MVW5 462 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ANHXE9PGG2 379 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 H0Y626 953 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 RNF103O00237 685 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 LINC01565O15544 149 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 TIMM44O43615 452 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 SUSD5O60279 629 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ANXA9O76027 345 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 PRAMEF12O95522 483 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 METTL18O95568 372 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CD160O95971 181 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 IFNB1P01574 187 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 JCHAINP01591 159 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 THBDP07204 575 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 RHOCP08134 193 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 GSTA2P09210 222 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CISD3P0C7P0 127 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ZSCAN5DPP0CG00 497 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 MYBL2P10244 700 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 LAMP2P13473 410 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ETS1P14921 441 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 CR2P20023 1033 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 HOXD9P28356 352 aaPredicted RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 ACVRL1P37023 503 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 EIF2DP41214 584 aaKnown RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 MAGEA3P43357 314 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 NPY2RP49146 381 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 GEMP55040 296 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 MRPS25P82663 173 aaKnown RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 MPP3Q13368 585 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 LAPTM5Q13571 262 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 HLTFQ14527 1009 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS41-211ENST00000466017 PRPSAP1Q14558 356 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 E2F5Q15329 346 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 DHCR24Q15392 516 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
VPS41-211ENST00000466017 FAM78AQ5JUQ0 283 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 ALS2CLQ60I27 953 aa5.55□□□□□ -1.52
VPS41-211ENST00000466017 RETSATQ6NUM9 610 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms