RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 NKAIN2Q5VXU1 208 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 TTI2Q6NXR4 508 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 TMEM71Q6P5X7 295 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 GJB7Q6PEY0 223 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 LEKR1Q6ZMV7 388 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ASB18Q6ZVZ8 466 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ENOSF1Q7L5Y1 443 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 RYBPQ8N488 228 aaPredicted RBP7.72□□□□□ -1.17
SMC3-202ENST00000462899 TEX19Q8NA77 164 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 CPT1CQ8TCG5 803 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ZDHHC1Q8WTX9 485 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 HMCESQ96FZ2 354 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 DPYSL5Q9BPU6 564 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 KLC2Q9H0B6 622 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 RAB6CQ9H0N0 254 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ALG2Q9H553 416 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ZNF768Q9H5H4 540 aaKnown RBP7.72□□□□□ -1.17
SMC3-202ENST00000462899 APMAPQ9HDC9 416 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 UBE2TQ9NPD8 197 aaPredicted RBP7.72□□□□□ -1.17
SMC3-202ENST00000462899 SIDT1Q9NXL6 827 aaKnown RBP7.72□□□□□ -1.17
SMC3-202ENST00000462899 TAAR2Q9P1P5 351 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 TMEM59LQ9UK28 342 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 VPS4AQ9UN37 437 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 SRPK3Q9UPE1 567 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 CCDC168Q8NDH2 2452 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ZSCAN5CA6NGD5 496 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 RHPN2P1A8MT19 583 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FAM72CH0Y354 149 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 MKRN2OSH3BPM6 223 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 CACNB4O00305 520 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 BUB1BO60566 1050 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 RECQL5O94762 991 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 STK17BO94768 372 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 IGSF6O95976 241 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 LDLRP01130 860 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 CEACAM5P06731 702 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 TCN2P20062 427 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 MPSTP25325 297 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 ELAVL4P26378 380 aaKnown RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 AK4P27144 223 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 SOX11P35716 441 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FASLGP48023 281 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 PMS2P54278 862 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 GPLD1P80108 840 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 CETN1Q12798 172 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FAM72AQ5TYM5 149 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 AFMIDQ63HM1 303 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FAM72DQ6L9T8 149 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 TRIM65Q6PJ69 517 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 LIPIQ6XZB0 460 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 ARCQ7LC44 396 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 HEATR4Q86WZ0 1026 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FAM72BQ86X60 149 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FAM131BQ86XD5 332 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 XYLT1Q86Y38 959 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 APLFQ8IW19 511 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 NETO2Q8NC67 525 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 CASKIN2Q8WXE0 1202 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 KIAA1143Q96AT1 154 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 ECHDC3Q96DC8 303 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 TCTN2Q96GX1 697 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 GSDMAQ96QA5 445 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 ZPBPQ9BS86 351 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FRMD8Q9BZ67 464 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 MAGEB5Q9BZ81 275 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 GTPBP4Q9BZE4 634 aaKnown RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 SCAND2PQ9GZW5 306 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 TRIT1Q9H3H1 467 aaKnown RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 CYP4F12Q9HCS2 524 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 MLXIPLQ9NP71 852 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 FBXO8Q9NRD0 319 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 TRNAU1APQ9NX07 287 aaKnown RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 DNAI1Q9UI46 699 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 AJAP1Q9UKB5 411 aaPredicted RBP7.71□□□□□ -1.18
SMC3-202ENST00000462899 TLK1Q9UKI8 766 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 ATP8A1Q9Y2Q0 1164 aa7.71□□□□□ -1.18
SMC3-202ENST00000462899 PCSK5Q92824 1860 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 GOLGA6L3A6NEY3 463 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 RAMP2O60895 175 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 RFPL1O75677 317 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 LRIG2O94898 1065 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 MAP3K6O95382 1288 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 MYCLP1P12525 358 aaPredicted RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 KELP23276 732 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 APBA1Q02410 837 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 RAD51Q06609 339 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 CYTH1Q15438 398 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 CCDC40Q4G0X9 1142 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 PAPD7Q5XG87 772 aaKnown RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 PNCKQ6P2M8 343 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 C16orf46Q6P387 395 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 BRAT1Q6PJG6 821 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 WDR74Q6RFH5 385 aaPredicted RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 CEACAM20Q6UY09 585 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 TMEM135Q86UB9 458 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 FAM129CQ86XR2 697 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 DNAAF5Q86Y56 855 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 Q8NA96 180 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms