RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SPOCD1Q6ZMY3 1216 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 ZNF765Q7L2R6 523 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 EFL1Q7Z2Z2 1120 aaKnown RBP16.1■□□□□ 0.17
COL7A1-203ENST00000459756 DAAM2Q86T65 1068 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 HEATR4Q86WZ0 1026 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 SLC35F3Q8IY50 421 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 RAVER1Q8IY67 606 aaKnown RBP16.1■□□□□ 0.17
COL7A1-203ENST00000459756 PELI3Q8N2H9 469 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 MAPK15Q8TD08 544 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 NAT6Q93015 286 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 LGR4Q9BXB1 951 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 ADGRE3Q9BY15 652 aa16.1■□□□□ 0.17
COL7A1-203ENST00000459756 TGM2P21980 687 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 STC1P52823 247 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 SKOR1P84550 965 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 CDK3Q00526 305 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 CYP4F3Q08477 520 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 RAET1GQ6H3X3 334 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 NT5DC3Q86UY8 548 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 NLRP8Q86W28 1048 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 NRSN1Q8IZ57 195 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 ARL10Q8N8L6 244 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 SPC24Q8NBT2 197 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 LPCAT1Q8NF37 534 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 EXD1Q8NHP7 514 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 AP2M1Q96CW1 435 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 IMP4Q96G21 291 aaKnown RBP16.09■□□□□ 0.17
COL7A1-203ENST00000459756 RBM41Q96IZ5 413 aaKnown RBP16.09■□□□□ 0.17
COL7A1-203ENST00000459756 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 DEPDC7Q96QD5 511 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 SMIM14Q96QK8 99 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 LYSMD1Q96S90 227 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 NRSN2Q9GZP1 204 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 MRPL40Q9NQ50 206 aaKnown RBP16.09■□□□□ 0.17
COL7A1-203ENST00000459756 SEPT10Q9P0V9 454 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 PADI4Q9UM07 663 aa16.09■□□□□ 0.17
COL7A1-203ENST00000459756 DSPP15924 2871 aaKnown RBP16.09■□□□□ 0.17
COL7A1-203ENST00000459756 A0A0U1RQS6 177 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 PRSS38A1L453 326 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GOLGA6BA6NDN3 693 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 ANKRD66B4E2M5 251 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 PYGLP06737 847 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GPR1P46091 355 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 PRKD1Q15139 912 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-203ENST00000459756 TCEA2Q15560 299 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 SLC14A2Q15849 920 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 KAZNQ674X7 775 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 ADAMTSL4Q6UY14 1074 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 RAD9BQ6WBX8 426 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 CCDC50Q8IVM0 306 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.16
COL7A1-203ENST00000459756 P3H4Q92791 437 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 BAG1Q99933 345 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-203ENST00000459756 MLPHQ9BV36 600 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-203ENST00000459756 CEP41Q9BYV8 373 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 FRMD8Q9BZ67 464 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-203ENST00000459756 SLC25A51Q9H1U9 297 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 ABCG8Q9H221 673 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 CYP4F12Q9HCS2 524 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 SAE1Q9UBE0 346 aaPredicted RBP16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GULP1Q9UBP9 304 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 MOSPD1Q9UJG1 213 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 GPR34Q9UPC5 381 aa16.08■□□□□ 0.16
COL7A1-203ENST00000459756 ASXL3Q9C0F0 2248 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 APC2O95996 2303 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 ACACAQ13085 2346 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 PKD1L2Q7Z442 2459 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 hCG_1818297A0A087WSY0 165 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 C1orf232A0A0U1RR37 186 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 MTSS1O43312 755 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 CEACAM5P06731 702 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 PECAM1P16284 738 aaPredicted RBP16.07■□□□□ 0.16
COL7A1-203ENST00000459756 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 RTP5Q14D33 572 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 PPP2R5EQ16537 467 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 QPCTQ16769 361 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 TEX44Q53QW1 395 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 RFLNAQ6ZTI6 216 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 TAF8Q7Z7C8 310 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 KYQ8NBH2 561 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 OR6C4Q8NGE1 309 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 WDR48Q8TAF3 677 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 KRT35Q92764 455 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 TADA1Q96BN2 335 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 TMEM168Q9H0V1 697 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 CARS2Q9HA77 564 aaKnown RBP16.07■□□□□ 0.16
COL7A1-203ENST00000459756 SIRPGQ9P1W8 387 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 IMPACTQ9P2X3 320 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 CD84Q9UIB8 345 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 SLC17A4Q9Y2C5 497 aa16.07■□□□□ 0.16
COL7A1-203ENST00000459756 REXO2Q9Y3B8 237 aaKnown RBP16.07■□□□□ 0.16
COL7A1-203ENST00000459756 RGSL1A5PLK6 1076 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms