RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TSHRP16473 764 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 JUNDP17535 347 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 CKMT2P17540 419 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 ACP1P24666 158 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 HTR1BP28222 390 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 TEAD1P28347 426 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 CD68P34810 354 aaPredicted RBP17.33■□□□□ 0.36
USP39-208ENST00000455732 ETV3P41162 512 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 STC1P52823 247 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 OTUD4Q01804 1114 aaKnown RBP17.33■□□□□ 0.36
USP39-208ENST00000455732 DPTQ07507 201 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 PTPRRQ15256 657 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 QPCTQ16769 361 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 AADACL2Q6P093 401 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 PNCKQ6P2M8 343 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 ZNF765Q7L2R6 523 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 TECPR1Q7Z6L1 1165 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 PHACTR4Q8IZ21 702 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 WDR26Q9H7D7 661 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 TRHDEQ9UKU6 1024 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 GUCA1BQ9UMX6 200 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 OR1A2Q9Y585 309 aa17.33■□□□□ 0.36
USP39-208ENST00000455732 NEMP2A6NFY4 417 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 FFAR2O15552 330 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 BLKP51451 505 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 PTSQ03393 145 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 KLF1Q13351 362 aaPredicted RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 ILKQ13418 452 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 CDKN3Q16667 212 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 Q6ZVL8 140 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 NLRP8Q86W28 1048 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 MARCH9Q86YJ5 346 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 CDKL3Q8IVW4 592 aaPredicted RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 ZNF567Q8N184 647 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 FUBP1Q96AE4 644 aaKnown RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 WDR92Q96MX6 357 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 SMIM14Q96QK8 99 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 FCRL5Q96RD9 977 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 FERMT1Q9BQL6 677 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 DUSP23Q9BVJ7 150 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 NLGN3Q9NZ94 848 aa17.32■□□□□ 0.36
USP39-208ENST00000455732 KLHL8Q9P2G9 620 aaPredicted RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 APOBEC3BQ9UH17 382 aaKnown RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 RALYQ9UKM9 306 aaKnown RBP17.32■□□□□ 0.36
USP39-208ENST00000455732 DSPP15924 2871 aaKnown RBP17.31■□□□□ 0.36
USP39-208ENST00000455732 H7C0C1 242 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 K7ESM1 405 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 CACNB4O00305 520 aaPredicted RBP17.31■□□□□ 0.36
USP39-208ENST00000455732 AQP9O43315 295 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 MT-CYBP00156 380 aaPredicted RBP17.31■□□□□ 0.36
USP39-208ENST00000455732 ALPPL2P10696 532 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 NFKB1P19838 968 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 KELP23276 732 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 RBL1P28749 1068 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 ATP5OP48047 213 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 PPARDQ03181 441 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 CDK18Q07002 472 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 CAMK2BQ13554 666 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 ALG11Q2TAA5 492 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 FAM182AQ5T1J6 154 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 DENND2CQ68D51 928 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 TMPRSS12Q86WS5 348 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 NRSN1Q8IZ57 195 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 RBFAQ8N0V3 343 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 PELI3Q8N2H9 469 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 FAM181AQ8N9Y4 354 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 TTC13Q8NBP0 860 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 SPATA22Q8NHS9 363 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 LRRC61Q9BV99 259 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 TEX101Q9BY14 249 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 SLC13A1Q9BZW2 595 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 TCEAL2Q9H3H9 227 aaPredicted RBP17.31■□□□□ 0.36
USP39-208ENST00000455732 SPASTQ9UBP0 616 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 FAM153AQ9UHL3 310 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 DGKBQ9Y6T7 804 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 ARHGEF17Q96PE2 2063 aaPredicted RBP17.31■□□□□ 0.36
USP39-208ENST00000455732 PKD1L2Q7Z442 2459 aa17.31■□□□□ 0.36
USP39-208ENST00000455732 LY6G6EA0A0G2JKS1 128 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 FAM149AA5PLN7 773 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 GOLGA6L9A6NEM1 432 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 PDE2AO00408 941 aaPredicted RBP17.3■□□□□ 0.36
USP39-208ENST00000455732 TPP1O14773 563 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 TNFRSF10CO14798 259 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 RASGRP1O95267 797 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 NDST3O95803 873 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 PYGLP06737 847 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 RBP3P10745 1247 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 MYCLP1P12525 358 aaPredicted RBP17.3■□□□□ 0.36
USP39-208ENST00000455732 CKMT1AP12532 417 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 HK3P52790 923 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 EIF3EP60228 445 aaKnown RBP17.3■□□□□ 0.36
USP39-208ENST00000455732 GALNT3Q14435 633 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 HS1BP3Q53T59 392 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 KDELC1Q6UW63 502 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 ENPP7Q6UWV6 458 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 PID1Q7Z2X4 250 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 OR56A4Q8NGH8 313 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 APOLD1Q96LR9 279 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 ALS2CR12Q96Q35 445 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms