RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SMIM31A0A1B0GVY4 71 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 TRIM24O15164 1050 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 INHBAP08476 426 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 CSNK1DP48730 415 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 STK19P49842 368 aaPredicted RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 SNRPD1P62314 119 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 OVGP1Q12889 678 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 AAK1Q2M2I8 961 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 LIN52Q52LA3 116 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 PTCRAQ6ISU1 281 aaPredicted RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 C22orf39Q6P5X5 142 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 KDELC1Q6UW63 502 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 ZNF534Q76KX8 674 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 LRRC6Q86X45 466 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 ANKMY2Q8IV38 441 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 PCDH20Q8N6Y1 951 aaKnown RBP15.9■□□□□ 0.14
SNX17-204ENST00000453453 OR52K1Q8NGK4 314 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 MRGPRX2Q96LB1 330 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 FAM96AQ9H5X1 160 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 CASS4Q9NQ75 786 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 LIMD1Q9UGP4 676 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 TMCO1Q9UM00 188 aa15.9■□□□□ 0.14
SNX17-204ENST00000453453 ANKRD36A6QL64 1941 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 SDR42E2A6NKP2 422 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 EIF4E1BA6NMX2 242 aaKnown RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 B2RBV5 119 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 K7ERQ8 282 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 ARNTLO00327 626 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 BIRC5O15392 142 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 SMAD6O43541 496 aaKnown RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 USP12O75317 370 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 AVILO75366 819 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 GSRP00390 522 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 APODP05090 189 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 MMP2P08253 660 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 CR2P20023 1033 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 GSTT1P30711 240 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 SSTR1P30872 391 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 OPRD1P41143 372 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 MAGEA3P43357 314 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 RECQLP46063 649 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 RGRP47804 291 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 NPY2RP49146 381 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 SESN2P58004 480 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 ITGA9Q13797 1035 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 MARK2Q7KZI7 788 aaKnown RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 KBTBD2Q8IY47 623 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 RYBPQ8N488 228 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 TERB1Q8NA31 727 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 TADA1Q96BN2 335 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 MTBPQ96DY7 904 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 FEM1CQ96JP0 617 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 APOL2Q9BQE5 337 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 TM6SF2Q9BZW4 377 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 KCNK12Q9HB15 430 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 FBXO6Q9NRD1 293 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 ELOVL2Q9NXB9 296 aa15.89■□□□□ 0.13
SNX17-204ENST00000453453 ARIH1Q9Y4X5 557 aaPredicted RBP15.89■□□□□ 0.13
SNX17-204ENST00000453453 REV3LO60673 3130 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 TTC24A2A3L6 582 aaPredicted RBP15.88■□□□□ 0.13
SNX17-204ENST00000453453 WDR91A4D1P6 747 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 TBC1D3BA6NDS4 549 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 SERPINA6P08185 405 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 PABPC4LP0CB38 370 aaKnown RBP15.88■□□□□ 0.13
SNX17-204ENST00000453453 ADRA1AP35348 466 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 ELK3P41970 407 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 GRIA1P42261 906 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 GRIA2P42262 883 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 RAD51Q06609 339 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 EFTUD2Q15029 972 aaKnown RBP eCLIP15.88■□□□□ 0.136e-8■■■■□ 26.1
SNX17-204ENST00000453453 DLG2Q15700 870 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 CNPY1Q3B7I2 92 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 MSS51Q4VC12 460 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 ATXN7L2Q5T6C5 722 aaPredicted RBP15.88■□□□□ 0.13
SNX17-204ENST00000453453 TMEM215Q68D42 235 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 CASC4Q6P4E1 433 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 IZUMO2Q6UXV1 221 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 RIPOR1Q6ZS17 1223 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 RNF135Q8IUD6 432 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 CCNJLQ8IV13 435 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 ULK2Q8IYT8 1036 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 PHC3Q8NDX5 983 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 OR2AP1Q8NGE2 309 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 EZH1Q92800 747 aaPredicted RBP15.88■□□□□ 0.13
SNX17-204ENST00000453453 DNASE1L2Q92874 299 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 NAT9Q9BTE0 207 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 NMUR2Q9GZQ4 415 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 IQCGQ9H095 443 aaKnown RBP15.88■□□□□ 0.13
SNX17-204ENST00000453453 TRPV5Q9NQA5 729 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 SIRPGQ9P1W8 387 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 CHMP2BQ9UQN3 213 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
SNX17-204ENST00000453453 COPEO14579 308 aa15.87■□□□□ 0.13
SNX17-204ENST00000453453 AP1G1O43747 822 aa15.87■□□□□ 0.13
SNX17-204ENST00000453453 ATP9BO43861 1147 aa15.87■□□□□ 0.13
SNX17-204ENST00000453453 BANF1O75531 89 aa15.87■□□□□ 0.13
SNX17-204ENST00000453453 KRT37O76014 449 aa15.87■□□□□ 0.13
SNX17-204ENST00000453453 KAT7O95251 611 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms