RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 PKD2L2Q9NZM6 624 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 IL17CQ9P0M4 197 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DMTF1Q9Y222 760 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 INVSQ9Y283 1065 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PLXNA2O75051 1894 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 BPTFQ12830 3046 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 WNT9AO14904 365 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.562e-6■■■■□ 19.3
SCN9A-204ENST00000452182 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 RECQL5O94762 991 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 C1SP09871 688 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 MGAT1P26572 445 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SPINT3P49223 89 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ZNF140P52738 457 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PTPN5P54829 565 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SESN2P58004 480 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DCDC1P59894 354 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DPTQ07507 201 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SGCGQ13326 291 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SETMARQ53H47 684 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 FNBP1LQ5T0N5 605 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PMS2CLQ68D20 193 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ZC3H14Q6PJT7 736 aaKnown RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ZNF765Q7L2R6 523 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 LPCAT2Q7L5N7 544 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 HSD11B1LQ7Z5J1 315 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DENND6BQ8NEG7 585 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PPHLN1Q8NEY8 458 aaKnown RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DTX3LQ8TDB6 740 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 UBXN4Q92575 508 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 DTD2Q96FN9 168 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SIGLEC10Q96LC7 697 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 LENG8Q96PV6 779 aaPredicted RBP11.57□□□□□ -0.56
SCN9A-204ENST00000452182 HINFPQ9BQA5 517 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 NAT9Q9BTE0 207 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 C1QTNF7Q9BXJ2 289 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 TSPYL1Q9H0U9 437 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 SOX13Q9UN79 622 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 PKP3Q9Y446 797 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 TCAF1Q9Y4C2 921 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 ARL5AQ9Y689 179 aa11.57□□□□□ -0.56
SCN9A-204ENST00000452182 TNRC6BQ9UPQ9 1833 aaKnown RBP11.56□□□□□ -0.56
SCN9A-204ENST00000452182 A0A0U1RQS6 177 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 A0A1W2PPC4 97 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 PRR23AA6NEV1 266 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 TNFRSF8P28908 595 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 ECHS1P30084 290 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 HADHAP40939 763 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 ACVR1Q04771 509 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 FGL2Q14314 439 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 ACOX1Q15067 660 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 PLK5Q496M5 336 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 Q6ZVL8 140 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 CENPUQ71F23 418 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 CCNJLQ8IV13 435 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 PARP9Q8IXQ6 854 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 AGGF1Q8N302 714 aaeCLIP11.56□□□□□ -0.561e-10■□□□□ 9.6
SCN9A-204ENST00000452182 STYXQ8WUJ0 223 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.56□□□□□ -0.56
SCN9A-204ENST00000452182 DNASE2BQ8WZ79 361 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 CENPTQ96BT3 561 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 PLEKHG4BQ96PX9 1271 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 ORAI3Q9BRQ5 295 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 IRF2BPLQ9H1B7 796 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 ANKZF1Q9H8Y5 726 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 NLE1Q9NVX2 485 aaPredicted RBP11.56□□□□□ -0.56
SCN9A-204ENST00000452182 SYBUQ9NX95 663 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 DOCK9Q9BZ29 2069 aa11.56□□□□□ -0.56
SCN9A-204ENST00000452182 THADAQ6YHU6 1953 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 FAM237BA0A1B0GVD1 139 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 H7C0S8 307 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 STX7O15400 261 aaKnown RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 RHOBTB1O94844 696 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 FSBPO95073 299 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 PAK4O96013 591 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 HOXB3P14651 431 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 BPIP17213 487 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 HNRNPA2B1P22626 353 aaKnown RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 CD27P26842 260 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 ETV3P41162 512 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 CARSP49589 748 aaKnown RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 DHX9Q08211 1270 aaKnown RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 TCF15Q12870 199 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 SRSF5Q13243 272 aaKnown RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 MTM1Q13496 603 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 ELF2Q15723 593 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 MSS51Q4VC12 460 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 WDR45BQ5MNZ6 344 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 TSTD2Q5T7W7 516 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 DENND2CQ68D51 928 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 CEP128Q6ZU80 1094 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 TMEM135Q86UB9 458 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 SLC41A1Q8IVJ1 513 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 TMEFF1Q8IYR6 380 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 MPP5Q8N3R9 675 aa11.55□□□□□ -0.56
SCN9A-204ENST00000452182 TP53I13Q8NBR0 393 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-204ENST00000452182 PRSS33Q8NF86 280 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms