RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SKOR1P84550 965 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 PPIDQ08752 370 aaKnown RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 ITKQ08881 620 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 FAM182AQ5T1J6 154 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 LRRC66Q68CR7 880 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 USP45Q70EL2 814 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 CNTD1Q8N815 330 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 WDR48Q8TAF3 677 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 GPBAR1Q8TDU6 330 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 SCG3Q8WXD2 468 aaKnown RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 GRAMD1AQ96CP6 724 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 ZNF578Q96N58 590 aaPredicted RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 BBC3Q96PG8 261 aaPredicted RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 LYSMD1Q96S90 227 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 LGMNQ99538 433 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 ABCG8Q9H221 673 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 PRORYQ9H606 182 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 CYP4F12Q9HCS2 524 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 PHPT1Q9NRX4 125 aaPredicted RBP12.34□□□□□ -0.43
MSH5-209ENST00000450148 SATB2Q9UPW6 733 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 LRRD1A4D1F6 860 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
MSH5-209ENST00000450148 ZNF30P17039 623 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 MX2P20592 715 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 NFKBIAP25963 317 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 STC1P52823 247 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 ERVPABLB-1P60509 514 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 CCL7P80098 99 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 IFI35P80217 286 aaPredicted RBP12.33□□□□□ -0.44
MSH5-209ENST00000450148 ZBTB17Q13105 803 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 ARHGEF7Q14155 803 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SPIDRQ14159 915 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 HLTFQ14527 1009 aaKnown RBP eCLIP12.33□□□□□ -0.44
MSH5-209ENST00000450148 C3orf38Q5JPI3 329 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 CERCAMQ5T4B2 595 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 LRRC38Q5VT99 294 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 TAF8Q7Z7C8 310 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 B3GNT8Q7Z7M8 397 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 NLRP8Q86W28 1048 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SPACA3Q8IXA5 215 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 CCDC13Q8IYE1 715 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 LSMEM2Q8N112 164 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.33□□□□□ -0.44
MSH5-209ENST00000450148 FAM46DQ8NEK8 389 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SCAMP4Q969E2 229 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SCARF2Q96GP6 870 aaPredicted RBP12.33□□□□□ -0.44
MSH5-209ENST00000450148 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SLC46A1Q96NT5 459 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 OLFM3Q96PB7 478 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 WDR24Q96S15 920 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SPATS2LQ9NUQ6 558 aaKnown RBP12.33□□□□□ -0.44
MSH5-209ENST00000450148 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
MSH5-209ENST00000450148 TRNAU1APQ9NX07 287 aaKnown RBP12.33□□□□□ -0.44
MSH5-209ENST00000450148 CD84Q9UIB8 345 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 APPL1Q9UKG1 709 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 SSUH2Q9Y2M2 353 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 PCDHGA8Q9Y5G5 932 aa12.33□□□□□ -0.44
MSH5-209ENST00000450148 CAPN8A6NHC0 703 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 CDRT15L2A8MXV6 281 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 D6RAR5 112 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 KCNK1O00180 336 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 CLDN7O95471 211 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 JCHAINP01591 159 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 IVLP07476 585 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 PNLIPP16233 465 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 GLB1P16278 677 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 POLD2P49005 469 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 TLE3Q04726 772 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 TAZQ16635 292 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 C14orf28Q4W4Y0 310 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 RAET1GQ6H3X3 334 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 NPNTQ6UXI9 565 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 ZNF765Q7L2R6 523 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
MSH5-209ENST00000450148 TC2NQ8N9U0 490 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 OR6C4Q8NGE1 309 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 LIN37Q96GY3 246 aaPredicted RBP12.32□□□□□ -0.44
MSH5-209ENST00000450148 COX14Q96I36 57 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 LRRN3Q9H3W5 708 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 CARS2Q9HA77 564 aaKnown RBP12.32□□□□□ -0.44
MSH5-209ENST00000450148 PCDH9Q9HC56 1237 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 MOSPD1Q9UJG1 213 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 SUFUQ9UMX1 484 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 RNF215Q9Y6U7 377 aa12.32□□□□□ -0.44
MSH5-209ENST00000450148 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 B4DGG1 531 aa12.31□□□□□ -0.44
MSH5-209ENST00000450148 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 RRP8O43159 456 aaKnown RBP12.31□□□□□ -0.44
MSH5-209ENST00000450148 FGF1P05230 155 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms