RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SGSM3Q96HU1 749 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MCCC1Q96RQ3 725 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CDX2Q99626 313 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 P2RY13Q9BPV8 354 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 PAIP2Q9BPZ3 127 aaKnown RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MCMBPQ9BTE3 642 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TMEM245Q9H330 911 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 KCNK12Q9HB15 430 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZDHHC4Q9NPG8 344 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SNX15Q9NRS6 342 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CACNA2D2Q9NY47 1150 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 IL17CQ9P0M4 197 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC39A10Q9ULF5 831 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TM9SF1O15321 606 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 HAUS5O94927 633 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 EPHX1P07099 455 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CTHP32929 405 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 IL12RB1P42701 662 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 LEPRP48357 1165 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CCT5P48643 541 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 GALK1P51570 392 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 USP10Q14694 798 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZRANB3Q5FWF4 1079 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 C9orf64Q5T6V5 341 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PRPF38BQ5VTL8 546 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 LRRC66Q68CR7 880 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CRTC1Q6UUV9 634 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SH2D5Q6ZV89 423 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 RAPH1Q70E73 1250 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CMC1Q7Z7K0 106 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 TSPAN33Q86UF1 283 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SUGP1Q8IWZ8 645 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 GPR150Q8NGU9 434 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 GDAP1Q8TB36 358 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ACMSDQ8TDX5 336 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 HLA-CQ95604 372 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 EID2BQ96D98 161 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 LYSMD1Q96S90 227 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 GPR22Q99680 433 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PHF7Q9BWX1 381 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 VPS11Q9H270 941 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CAB39LQ9H9S4 337 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 FBRSL1Q9HCM7 1045 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 THAP10Q9P2Z0 257 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 B4GALT6Q9UBX8 382 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 MUC22E2RYF6 1773 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 MYO10Q9HD67 2058 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 FAM95CA0A1B0GW59 222 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 UPK3BL1B0FP48 263 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 UPK3BL2E5RIL1 263 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SPECC1L-ADORA2AF8WAN1 911 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 H7C0S8 307 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 OGNP20774 298 aaKnown RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PSMA3P25788 255 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 LSP1P33241 339 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CCNFP41002 786 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 STC1P52823 247 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC12A2P55011 1212 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SEC13P55735 322 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PDE1CQ14123 709 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ARHGEF7Q14155 803 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 E2F5Q15329 346 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZNF789Q5FWF6 425 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 HHATQ5VTY9 493 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CNSTQ6PJW8 725 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 GALNT7Q86SF2 657 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 DSG4Q86SJ6 1040 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 TTC7BQ86TV6 843 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC44A3Q8N4M1 653 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PNPLA1Q8N8W4 532 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ACVR1CQ8NER5 493 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PBXIP1Q96AQ6 731 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CENPTQ96BT3 561 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ATG2BQ96BY7 2078 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ERLEC1Q96DZ1 483 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ELMO2Q96JJ3 720 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 ACOX2Q99424 681 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 NDNQ99608 321 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 DKK3Q9UBP4 350 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 CRYL1Q9Y2S2 319 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 PPIL1Q9Y3C6 166 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
SMPD4P1-203ENST00000443839 TSPAN11A1L157 253 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 ANTXRLA6NF34 631 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 C16orf96A6NNT2 1141 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 PFDN6O15212 129 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 PRAMEF1O95521 474 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 S1PR4O95977 384 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 IL1BP01584 269 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 CYP2A6P11509 494 aaPredicted RBP9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 LHCGRP22888 699 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 CRHR1P34998 444 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 TTPAP49638 278 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 CLCN5P51795 746 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 IL9RQ01113 521 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 SEMA3AQ14563 771 aa9.48□□□□□ -0.89
SMPD4P1-203ENST00000443839 CDKN3Q16667 212 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms