RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 ELOCQ15369 112 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 PPP2R5EQ16537 467 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 QPCTQ16769 361 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 TEX44Q53QW1 395 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 CCDC181Q5TID7 509 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 TECPR1Q7Z6L1 1165 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 FSTL5Q8N475 847 aaPredicted RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 SPATA22Q8NHS9 363 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 ZCCHC14Q8WYQ9 949 aaKnown RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 IMP4Q96G21 291 aaKnown RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 TBATAQ96M53 351 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 MLPHQ9BV36 600 aaPredicted RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 ADGRE3Q9BY15 652 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 SLC25A51Q9H1U9 297 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 ABCG8Q9H221 673 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 GLOD4Q9HC38 313 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 PHPT1Q9NRX4 125 aaPredicted RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 EVA1BQ9NVM1 165 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 KCTD5Q9NXV2 234 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 C1orf232A0A0U1RR37 186 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 CCDC66A2RUB6 948 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 ANKRD66B4E2M5 251 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 F5H423 210 aaPredicted RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 PMPCBO75439 489 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 MT-CYBP00156 380 aaPredicted RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 HOXC4P09017 264 aaPredicted RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 CTNNA2P26232 953 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 GPR1P46091 355 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 STC1P52823 247 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 CDK3Q00526 305 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 E2F1Q01094 437 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 INSM1Q01101 510 aaPredicted RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 WASHC5Q12768 1159 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 NR0B2Q15466 257 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 C6orf132Q5T0Z8 1188 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 AADACL2Q6P093 401 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 GUSBP11Q6P575 273 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 BBS12Q6ZW61 710 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 EFL1Q7Z2Z2 1120 aaKnown RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 LRRC57Q8N9N7 239 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 IFI44Q8TCB0 444 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 AP2M1Q96CW1 435 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 TEKT5Q96M29 485 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 AGAP2Q99490 1192 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 BOCQ9BWV1 1114 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 TEX101Q9BY14 249 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 UBP1Q9NZI7 540 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 KLHL8Q9P2G9 620 aaPredicted RBP13.71□□□□□ -0.21
LTBR-202ENST00000440421 GULP1Q9UBP9 304 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 DNPEPQ9ULA0 475 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 ZMIZ1Q9ULJ6 1067 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 DGKBQ9Y6T7 804 aa13.71□□□□□ -0.21
LTBR-202ENST00000440421 MAP1BP46821 2468 aaKnown RBP13.7□□□□□ -0.22
LTBR-202ENST00000440421 PRSS38A1L453 326 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 TRABD2BA6NFA1 517 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 H7C0C1 242 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 SLC4A1P02730 911 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 PIRTP0C851 137 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 NFKB1P19838 968 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 CD68P34810 354 aaPredicted RBP13.7□□□□□ -0.22
LTBR-202ENST00000440421 ATP5OP48047 213 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 POLD2P49005 469 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 RWDD2BP57060 319 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 COPS2P61201 443 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 DPTQ07507 201 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 TARDBPQ13148 414 aaKnown RBP eCLIP13.7□□□□□ -0.22
LTBR-202ENST00000440421 DOK6Q6PKX4 331 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 PEX26Q7Z412 305 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 GKN2Q86XP6 184 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 KDF1Q8NAX2 398 aaPredicted RBP13.7□□□□□ -0.22
LTBR-202ENST00000440421 SCG3Q8WXD2 468 aaKnown RBP13.7□□□□□ -0.22
LTBR-202ENST00000440421 ALG3Q92685 438 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 GLMNQ92990 594 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 QKIQ96PU8 341 aaKnown RBP eCLIP13.7□□□□□ -0.22
LTBR-202ENST00000440421 TRIB3Q96RU7 358 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 LYSMD1Q96S90 227 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 FAM118BQ9BPY3 351 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 RIOK2Q9BVS4 552 aaKnown RBP13.7□□□□□ -0.22
LTBR-202ENST00000440421 OSBPL8Q9BZF1 889 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 TMEM168Q9H0V1 697 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 ABCG4Q9H172 646 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 USP29Q9HBJ7 922 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 NCKIPSDQ9NZQ3 722 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 PACSIN2Q9UNF0 486 aaPredicted RBP13.7□□□□□ -0.22
LTBR-202ENST00000440421 GPR34Q9UPC5 381 aa13.7□□□□□ -0.22
LTBR-202ENST00000440421 FRYQ5TBA9 3013 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms