RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 DAW1Q8N136 415 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 GLIS1Q8NBF1 620 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPATA4Q8NEY3 305 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 RDM1Q8NG50 284 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 OR56A3Q8NH54 315 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 BPIFB1Q8TDL5 484 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 STYXQ8WUJ0 223 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM174Q8WUU8 243 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ASB12Q8WXK4 309 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 C5orf34Q96MH7 638 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 FIZ1Q96SL8 496 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 STRA6Q9BX79 667 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MOV10L1Q9BXT6 1211 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 EIF2AQ9BY44 585 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CHST8Q9H2A9 424 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ST6GALNAC4Q9H4F1 302 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPAP3Q9H6T3 665 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 VIPAS39Q9H9C1 493 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM8AQ9HCN3 771 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 SIX2Q9NPC8 291 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 A1CFQ9NQ94 594 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 NECTIN3Q9NQS3 549 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 VPS45Q9NRW7 570 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 AGPAT3Q9NRZ7 376 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 RASSF1Q9NS23 344 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ANKEF1Q9NU02 776 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 DMAC2Q9NW81 257 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 GCNT4Q9P109 453 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 WRAP73Q9P2S5 460 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 CNOT7Q9UIV1 285 aaKnown RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 HACL1Q9UJ83 578 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF112Q9UJU3 913 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 DNAJC12Q9UKB3 198 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 EXOC7Q9UPT5 735 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ATP8B3O60423 1300 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF646O15015 1829 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZMYM2Q9UBW7 1377 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYH8P13535 1937 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYH4Q9Y623 1939 aa3.6□□□□□ -1.83
HMGB3P11-201ENST00000440127 COL4A5P29400 1685 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 LOC102723971A0A1B0GUV8 181 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 KCNU1A8MYU2 1149 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM233B4DJY2 109 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 PYCARD-AS1I3L0S3 204 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 VWA5AO00534 786 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CES2O00748 559 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 RGS10O43665 173 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 ATP9AO75110 1047 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 TNFRSF6BO95407 300 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CD4P01730 458 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 H2AFZP0C0S5 128 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 TXNP10599 105 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CD19P15391 556 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CAPN3P20807 821 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 VAMP7P51809 220 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 POLGP54098 1239 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 BCAT1P54687 386 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPS6P62753 249 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 TNNC1P63316 161 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 E2F1Q01094 437 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYL7Q01449 175 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 BFSP1Q12934 665 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 KLF9Q13886 244 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 BAATQ14032 418 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 COG2Q14746 738 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 DRAP1Q14919 205 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPS6KA1Q15418 735 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM187BQ17R55 369 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 XKR9Q5GH70 373 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CEP78Q5JTW2 689 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 FBXO47Q5MNV8 452 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM180BQ6P0A1 224 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 ALKBH5Q6P6C2 394 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 GJB7Q6PEY0 223 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 VSTM1Q6UX27 236 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 H2AFVQ71UI9 128 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 LRRTM4Q86VH4 590 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CHSY1Q86X52 802 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 KRT73Q86Y46 540 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 APOBEC3FQ8IUX4 373 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 C12orf56Q8IXR9 622 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 IFT20Q8IY31 132 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 SYCE1Q8N0S2 351 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 XXYLT1Q8NBI6 393 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPPL3Q8TCT6 385 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 U2AF1L4Q8WU68 220 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPSB4Q96A44 273 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 HVCN1Q96D96 273 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 CDHR1Q96JP9 859 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 RITA1Q96K30 269 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 C12orf42Q96LP6 360 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 THAP7Q9BT49 309 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 LRRC1Q9BTT6 524 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 KATNAL1Q9BW62 490 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 INTS2Q9H0H0 1204 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 PDE11AQ9HCR9 933 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZCCHC17Q9NP64 241 aaKnown RBP3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 MED4Q9NPJ6 270 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 PXMP2Q9NR77 195 aa3.59□□□□□ -1.83
HMGB3P11-201ENST00000440127 RNF146Q9NTX7 359 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms