RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TRMT13Q9NUP7 481 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 CD300AQ9UGN4 299 aa13.55□□□□□ -0.24
HERPUD1-204ENST00000439977 A0A0D9SEW6 157 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 NME4O00746 187 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 CD3EAPO15446 510 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 GLP2RO95838 553 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 CD1DP15813 335 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 HERVK_113P63132 956 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 PLOD1Q02809 727 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 MAP7Q14244 749 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 LPIN1Q14693 890 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 RPS6KA2Q15349 733 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 C10orf120Q5SQS8 335 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 DNAJB14Q8TBM8 379 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TWIST2Q8WVJ9 160 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 ERVK-6Q9BXR3 956 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TUBB1Q9H4B7 451 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 VPS45Q9NRW7 570 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 ETAA1Q9NY74 926 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TMEM181Q9P2C4 612 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 MROH6A6NGR9 719 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC7A4O43246 635 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TSPAN3O60637 253 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 HGFP14210 728 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 GPX3P22352 226 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 DNAJB1P25685 340 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 CTGFP29279 349 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 PRDX3P30048 256 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 FMO4P31512 558 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 CDKN1CP49918 316 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 MRPL10Q7Z7H8 261 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 MON1AQ86VX9 555 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 CLYBLQ8N0X4 340 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 UMODL1-AS1Q8N2C9 162 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TSPAN14Q8NG11 270 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 SUSD3Q96L08 255 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TRIM62Q9BVG3 475 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 MRPS26Q9BYN8 205 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 ATP13A1Q9HD20 1204 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 IKZF3Q9UKT9 509 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 TLR6Q9Y2C9 796 aa13.54□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC12A8A0AV02 714 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 ARHGAP10A1A4S6 786 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RAMP2O60895 175 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 C8BP07358 591 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 MTHFD2P13995 350 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RGS2P41220 211 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 INHBCP55103 352 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 HUNKP57058 714 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 CCDC117Q8IWD4 279 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 NUP93Q8N1F7 819 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 HBEGFQ99075 208 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 MFSD1Q9H3U5 465 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF696Q9H7X3 374 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 GALPQ9UBC7 116 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SUPT3HB4E1H0 165 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 ENPP3O14638 875 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SUPT3HO75486 399 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 NCK1P16333 377 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RHOQP17081 205 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 PLA2G4EQ3MJ16 856 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 PAQR3Q6TCH7 311 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 B3GNT6Q6ZMB0 384 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 CHERPQ8IWX8 916 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 FAM47BQ8NA70 645 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC39A13Q96H72 371 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 TEX37Q96LM6 180 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SPON2Q9BUD6 331 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 PRDM5Q9NQX1 630 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 NYNRINQ9P2P1 1898 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 CLASP2O75122 1294 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 DUSP11O75319 330 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 BAIAP3O94812 1187 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 OXTRP30559 389 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC7A1P30825 629 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 AGTR2P50052 363 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RPS6KA3P51812 740 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RPL26P61254 145 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 PRKCQQ04759 706 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 MGAT3Q09327 533 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RABL3Q5HYI8 236 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 TBCELQ5QJ74 424 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF683Q8IZ20 524 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 ACOX2Q99424 681 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SLC2A11Q9BYW1 496 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 RBM38Q9H0Z9 239 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 SLAMF8Q9P0V8 285 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 USP22Q9UPT9 525 aa13.53□□□□□ -0.24
HERPUD1-204ENST00000439977 TCRBV3S1A0A5B6 114 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 AZIN1O14977 448 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ANGPT2O15123 496 aa13.52□□□□□ -0.24
HERPUD1-204ENST00000439977 ZNF623O75123 536 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms