RNA–Protein interactions for RNA: ENST00000437152.7

SH2D3A-202, Transcript of SH2 domain containing 3A, humanhuman

TSL 2 BASIC

Gene SH2D3A, Length 2,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-202ENST00000437152 RNF168Q8IYW5 571 aaPredicted RBP23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 OR52K2Q8NGK3 314 aa23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 OR13C4Q8NGS5 318 aa23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 PYDC1Q8WXC3 89 aa23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 PHF21BQ96EK2 531 aa23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 MYRFLQ96LU7 910 aa23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 TCF12Q99081 682 aa23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 G3BP2Q9UN86 482 aaKnown RBP23.25■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 A0A1B0GVM2 712 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 TCAF2A6NFQ2 919 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 BUD23O43709 281 aaKnown RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 GJB5O95377 273 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF37AP17032 561 aaPredicted RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF140P52738 457 aaPredicted RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 RPS24P62847 133 aaKnown RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 HERVK_113P63132 956 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF177Q13360 481 aaPredicted RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 GSTA3Q16772 222 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 DENND1CQ8IV53 801 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 KBTBD2Q8IY47 623 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 RCN3Q96D15 328 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 PRICKLE1Q96MT3 831 aaPredicted RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 AARSD1Q9BTE6 412 aaKnown RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 SPON2Q9BUD6 331 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 ERVK-6Q9BXR3 956 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 UTP6Q9NYH9 597 aaKnown RBP23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 TRPM5Q9NZQ8 1165 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 TBC1D30Q9Y2I9 924 aa23.24■■□□□ 1.31
SH2D3A-202ENST00000437152 A6NHS1 94 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 SORBS2O94875 1100 aaKnown RBP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 HMGA1P17096 107 aaKnown RBP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PMLP29590 882 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 MAGEA10P43363 369 aaPredicted RBP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 TIAL1Q01085 375 aaKnown RBP eCLIP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 MAPRE2Q15555 327 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 TAF1AQ15573 450 aaPredicted RBP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PIM3Q86V86 326 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PNPLA1Q8N8W4 532 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 TRAF6Q9Y4K3 522 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 ANKRD36A6QL64 1941 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 STC2O76061 302 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 RHOCP08134 193 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 ERFP50548 548 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PLK1P53350 603 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 XIAPP98170 497 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 ART3Q13508 389 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 SQLEQ14534 574 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 SEMA3AQ14563 771 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PIGGQ5H8A4 983 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 ADGRF1Q5T601 910 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PDE4DIPQ5VU43 2346 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 AFTPHQ6ULP2 937 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 PTERQ96BW5 349 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 DDX50Q9BQ39 737 aaKnown RBP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 ECSITQ9BQ95 431 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 TFB2MQ9H5Q4 396 aaKnown RBP23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 SYTL2Q9HCH5 934 aa23.23■■□□□ 1.31
SH2D3A-202ENST00000437152 CD1EP15812 388 aa23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 CORO1AP31146 461 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 KCNC1P48547 511 aa23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 PTPRCAPQ14761 206 aa23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 IZUMO2Q6UXV1 221 aa23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 HERVK_113Q902F9 699 aa23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 TDRD1Q9BXT4 1180 aaKnown RBP23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 WDR41Q9HAD4 459 aa23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 POLR3BQ9NW08 1133 aaPredicted RBP23.22■■□□□ 1.31
SH2D3A-202ENST00000437152 C2orf81A6NN90 581 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 SKAP2O75563 359 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 SUPT7LO94864 414 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 KLKB1P03952 638 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 PDHA1P08559 390 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 CDC25CP30307 473 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 SCNN1BP51168 640 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 STX5Q13190 355 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 TPGS2Q68CL5 300 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 APLFQ8IW19 511 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF461Q8TAF7 563 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 MICAL1Q8TDZ2 1067 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 TRMT2BQ96GJ1 504 aaKnown RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 CDRT15Q96T59 188 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 SCUBE2Q9NQ36 999 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 ZDHHC7Q9NXF8 308 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 VPS9D1Q9Y2B5 631 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 ABLIM3O94929 683 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 SLC4A1P02730 911 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 PIRTP0C851 137 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 RGRP47804 291 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 PPP3CCP48454 512 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 PDAP1Q13442 181 aaKnown RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF423Q2M1K9 1284 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 UNC50Q53HI1 259 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 ZNF783Q6ZMS7 281 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 GLT6D1Q7Z4J2 308 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 RAB44Q7Z6P3 723 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 RMDN1Q96DB5 314 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 NR1H4Q96RI1 486 aaPredicted RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 TNFRSF12AQ9NP84 129 aa23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 AGO1Q9UL18 857 aaKnown RBP23.21■■□□□ 1.31
SH2D3A-202ENST00000437152 CASQ2O14958 399 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms