RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 RIBC1Q8N443 379 aaPredicted RBP22.99■■□□□ 1.27
CPSF4-204ENST00000436336 FAM167BQ9BTA0 163 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 OSBPL6Q9BZF3 934 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 NSMCE4AQ9NXX6 385 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 FKBPLQ9UIM3 349 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 GGT7Q9UJ14 662 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 IKBKGQ9Y6K9 419 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CCDC162PA2VCL2 907 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 GOLGA6L10A6NI86 522 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SMIM23A6NLE4 172 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 GOLGA8KD6RF30 607 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 H0Y858 1186 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 GOLGA8TH3BQL2 631 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SPINT1O43278 529 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 GOT2P00505 430 aaKnown RBP22.98■■□□□ 1.27
CPSF4-204ENST00000436336 C1SP09871 688 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 MYZAPP0CAP1 466 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SLCO1A2P46721 670 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 STC1P52823 247 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SMAD1Q15797 465 aaKnown RBP22.98■■□□□ 1.27
CPSF4-204ENST00000436336 NEPROQ6NW34 567 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 AFTPHQ6ULP2 937 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SLC26A11Q86WA9 606 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 HDDC3Q8N4P3 179 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 ZBTB9Q96C00 473 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 MRRFQ96E11 262 aaKnown RBP22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SGSM3Q96HU1 749 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SH3GL2Q99962 352 aa22.98■■□□□ 1.27
CPSF4-204ENST00000436336 SUDS3Q9H7L9 328 aaPredicted RBP22.98■■□□□ 1.27
CPSF4-204ENST00000436336 POLMQ9NP87 494 aaPredicted RBP22.98■■□□□ 1.27
CPSF4-204ENST00000436336 PSMD11O00231 422 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 INHBAP08476 426 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 PTPN5P54829 565 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 AGBL4Q5VU57 503 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 ZDHHC20Q5W0Z9 365 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 ADGRD1Q6QNK2 874 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 PTAR1Q7Z6K3 402 aaPredicted RBP22.97■■□□□ 1.27
CPSF4-204ENST00000436336 RAVER1Q8IY67 606 aaKnown RBP22.97■■□□□ 1.27
CPSF4-204ENST00000436336 OR4L1Q8NH43 312 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 SIPA1Q96FS4 1042 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 AGAP2Q99490 1192 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 EURLQ9NYK6 297 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 PKD2L2Q9NZM6 624 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 PSMC3IPQ9P2W1 217 aaPredicted RBP22.97■■□□□ 1.27
CPSF4-204ENST00000436336 ITM2BQ9Y287 266 aa22.97■■□□□ 1.27
CPSF4-204ENST00000436336 A0A1W2PP55 124 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 ZXDAP98168 799 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 SFSWAPQ12872 951 aaKnown RBP22.96■■□□□ 1.27
CPSF4-204ENST00000436336 GPS2Q13227 327 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 TTC31Q49AM3 519 aaPredicted RBP22.96■■□□□ 1.27
CPSF4-204ENST00000436336 TMEM52BQ4KMG9 183 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.96■■□□□ 1.27
CPSF4-204ENST00000436336 LIPIQ6XZB0 460 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 GOLGA6L1Q8N7Z2 621 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 DCAKDQ8WVC6 231 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 FAM131CQ96AQ9 280 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 MRGPRX1Q96LB2 322 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 CPNE1Q99829 537 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 OMDQ99983 421 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 TMBIM4Q9HC24 238 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 SLC17A6Q9P2U8 582 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 ZNF180Q9UJW8 692 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 APPL1Q9UKG1 709 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 FADS3Q9Y5Q0 445 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 TCRBV21S2A2A0A5A6 115 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 OR51F1A6NGY5 319 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 AP1G1O43747 822 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 RNASEH2AO75792 299 aaKnown RBP22.96■■□□□ 1.27
CPSF4-204ENST00000436336 ELFN1P0C7U0 828 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 BPIP17213 487 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 MC4RP32245 332 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 SPAM1P38567 509 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 SPINT3P49223 89 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 DGKEP52429 567 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 XIAPP98170 497 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 PEX6Q13608 980 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 TRIM67Q6ZTA4 783 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 PJA1Q8NG27 643 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 GPR150Q8NGU9 434 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 SLC6A17Q9H1V8 727 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 CATSPERZQ9NTU4 200 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 FBXL12Q9NXK8 326 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 TXNDC16Q9P2K2 825 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 LGALS13Q9UHV8 139 aa22.96■■□□□ 1.27
CPSF4-204ENST00000436336 PLXNB3Q9ULL4 1909 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 RGSL1A5PLK6 1076 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 NEMP1O14524 444 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 CD3EAPO15446 510 aaKnown RBP22.95■■□□□ 1.26
CPSF4-204ENST00000436336 UGT1A9O60656 530 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 NDUFV2P19404 249 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 GAS6Q14393 721 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 FASTKD1Q53R41 847 aaKnown RBP22.95■■□□□ 1.26
CPSF4-204ENST00000436336 ZNF470Q6ECI4 717 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 KIAA0408Q6ZU52 694 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 KBTBD6Q86V97 674 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 PLEKHG4BQ96PX9 1271 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 UGT1A7Q9HAW7 530 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 UGT1A10Q9HAW8 530 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 UGT1A8Q9HAW9 530 aa22.95■■□□□ 1.26
CPSF4-204ENST00000436336 RAD18Q9NS91 495 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms