RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SPATA22Q8NHS9 363 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 CCHCR1Q8TD31 782 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 HES6Q96HZ4 224 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 SMIM14Q96QK8 99 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 TRIB3Q96RU7 358 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 HERPUD2Q9BSE4 406 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 GRPEL1Q9HAV7 217 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 NCKIPSDQ9NZQ3 722 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 FAM153AQ9UHL3 310 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 PNMA8BQ9ULN7 279 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 PACSIN2Q9UNF0 486 aaPredicted RBP16.24■□□□□ 0.19
SMPD4-207ENST00000435455 AKAP13Q12802 2813 aa16.24■□□□□ 0.19
SMPD4-207ENST00000435455 C1orf232A0A0U1RR37 186 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA6CA6NDK9 693 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA6BA6NDN3 693 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 LMO7DNF2Z398 122 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 K7ESM1 405 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TPP1O14773 563 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 DDX3YO15523 660 aaKnown RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 RFPL3O75679 317 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 STK10O94804 968 aaKnown RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 CLDN7O95471 211 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 NDST3O95803 873 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TOP3BO95985 862 aaKnown RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 MT-CYBP00156 380 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 PYGLP06737 847 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA6DP0CG33 693 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GIMD1P0DJR0 217 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 MYCLP1P12525 358 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 CTSEP14091 401 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 NFKB1P19838 968 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 CD68P34810 354 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TNNT3P45378 269 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 ACADVLP49748 655 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 DUSP3P51452 185 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 EIF3EP60228 445 aaKnown RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 DAB2P98082 770 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 DNAJC3Q13217 504 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 ILKQ13418 452 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GALNT3Q14435 633 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 PCSK7Q16549 785 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 CCDC157Q569K6 752 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 RAET1GQ6H3X3 334 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 ZCCHC8Q6NZY4 707 aaKnown RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 AADACL2Q6P093 401 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 ZNF662Q6ZS27 426 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 PID1Q7Z2X4 250 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 KDELC2Q7Z4H8 507 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 NLRP8Q86W28 1048 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 ZNF567Q8N184 647 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 PELI3Q8N2H9 469 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 SDR16C5Q8N3Y7 309 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TTC13Q8NBP0 860 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TSACCQ96A04 125 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 SRPK1Q96SB4 655 aaKnown RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 LRRC61Q9BV99 259 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TEX101Q9BY14 249 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 ABCG8Q9H221 673 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 TCEAL2Q9H3H9 227 aaPredicted RBP16.23■□□□□ 0.19
SMPD4-207ENST00000435455 CAAP1Q9H8G2 361 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 GOLGA6AQ9NYA3 693 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 DGKBQ9Y6T7 804 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 KNTC1P50748 2209 aa16.23■□□□□ 0.19
SMPD4-207ENST00000435455 A0A0U1RQS6 177 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 RGSL1A5PLK6 1076 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 TMEM202A6NGA9 273 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 PMPCBO75439 489 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 GCATO75600 419 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 TNFP01375 233 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 ANXA6P08133 673 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 RBP3P10745 1247 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 SPINK2P20155 84 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 ACP1P24666 158 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 RBL1P28749 1068 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 DEFB133Q30KQ1 61 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 FAM182AQ5T1J6 154 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 DARS2Q6PI48 645 aaKnown RBP16.22■□□□□ 0.19
SMPD4-207ENST00000435455 ADAMTSL4Q6UY14 1074 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 RD3Q7Z3Z2 195 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 HEATR4Q86WZ0 1026 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 GALNT15Q8N3T1 639 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 SCG3Q8WXD2 468 aaKnown RBP16.22■□□□□ 0.19
SMPD4-207ENST00000435455 OR1E3Q8WZA6 343 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 GLMNQ92990 594 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 AP2M1Q96CW1 435 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 FCRL5Q96RD9 977 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 MAGEE1Q9HCI5 957 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 PKD2L2Q9NZM6 624 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 KLK13Q9UKR3 277 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 MSRB2Q9Y3D2 182 aa16.22■□□□□ 0.19
SMPD4-207ENST00000435455 EPOP01588 193 aa16.21■□□□□ 0.19
SMPD4-207ENST00000435455 CKMT1AP12532 417 aa16.21■□□□□ 0.19
SMPD4-207ENST00000435455 GPR1P46091 355 aa16.21■□□□□ 0.19
SMPD4-207ENST00000435455 SPINT3P49223 89 aa16.21■□□□□ 0.19
SMPD4-207ENST00000435455 WNT3AP56704 352 aa16.21■□□□□ 0.19
SMPD4-207ENST00000435455 CCZ1BP86790 482 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms