RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 DPP6P42658 865 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 SPINT3P49223 89 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 CREB5Q02930 508 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 PDIA2Q13087 525 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 MSLNQ13421 630 aaPredicted RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 MTM1Q13496 603 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 AGERQ15109 404 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 SKIDA1Q1XH10 827 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 WDR45BQ5MNZ6 344 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 CERCAMQ5T4B2 595 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 HSD11B1LQ7Z5J1 315 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 TMC3Q7Z5M5 1100 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 CBARPQ8N350 705 aaPredicted RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 GPR161Q8N6U8 529 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 FRMD1Q8N878 549 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 EIF1ADQ8N9N8 165 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 IFT81Q8WYA0 676 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.99□□□□□ -0.65
CHD4-202ENST00000430771 COQ10AQ96MF6 247 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 HSPA12BQ96MM6 686 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 PLEKHG4BQ96PX9 1271 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 SLC17A9Q9BYT1 436 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 DUSP15Q9H1R2 295 aaPredicted RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 KCNH6Q9H252 994 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 ZDHHC18Q9NUE0 388 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 ZFR2Q9UPR6 939 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 INVSQ9Y283 1065 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 COQ6Q9Y2Z9 468 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 MAD1L1Q9Y6D9 718 aa10.99□□□□□ -0.65
CHD4-202ENST00000430771 TNRC6BQ9UPQ9 1833 aaKnown RBP10.99□□□□□ -0.65
CHD4-202ENST00000430771 THADAQ6YHU6 1953 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 FAM237BA0A1B0GVD1 139 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 A0A1W2PPC4 97 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 MROH6A6NGR9 719 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 METTL12A8MUP2 240 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 C10orf142B7Z368 130 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 AURKAO14965 403 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 AVILO75366 819 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 USP1O94782 785 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 IGHV4-34P06331 123 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 TUBBP07437 444 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 TSHRP16473 764 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 PTPN5P54829 565 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 PRAMEP78395 509 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 PTSQ03393 145 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
CHD4-202ENST00000430771 PTPRRQ15256 657 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 IRF4Q15306 451 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 CCDC38Q502W7 563 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 TSTD2Q5T7W7 516 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 LYSMD4Q5XG99 296 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 PDPK2PQ6A1A2 396 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 ESRP1Q6NXG1 681 aaKnown RBP10.98□□□□□ -0.65
CHD4-202ENST00000430771 AFTPHQ6ULP2 937 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 CCDC25Q86WR0 208 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 ZBED8Q8IZ13 594 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 OR4K2Q8NGD2 314 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 FAM174AQ8TBP5 190 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHD4-202ENST00000430771 ZNF669Q96BR6 464 aaPredicted RBP10.98□□□□□ -0.65
CHD4-202ENST00000430771 BIRC7Q96CA5 298 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 AP2M1Q96CW1 435 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 DNAJC1Q96KC8 554 aaKnown RBP10.98□□□□□ -0.65
CHD4-202ENST00000430771 HINFPQ9BQA5 517 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 ZSCAN5AQ9BUG6 496 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 KIFC1Q9BW19 673 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 C1QTNF2Q9BXJ5 285 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 ANKZF1Q9H8Y5 726 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 SAYSD1Q9NPB0 183 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 NLE1Q9NVX2 485 aaPredicted RBP10.98□□□□□ -0.65
CHD4-202ENST00000430771 IL17CQ9P0M4 197 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 APPL1Q9UKG1 709 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 RAB23Q9ULC3 237 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 CHMP2BQ9UQN3 213 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 SPAG17Q6Q759 2223 aa10.98□□□□□ -0.65
CHD4-202ENST00000430771 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 GLYATL1P3A0A0U1RQE8 302 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 CCDC78A2IDD5 438 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 PRAMEF26H0Y7S4 382 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 H7C0S8 307 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 SLC31A1O15431 190 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 PRAMEF1O95521 474 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 PCCBP05166 539 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 POLBP06746 335 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 BPIP17213 487 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 ITGALP20701 1170 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 CD27P26842 260 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 TEAD1P28347 426 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 ECHS1P30084 290 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 DHPSP49366 369 aaPredicted RBP10.97□□□□□ -0.65
CHD4-202ENST00000430771 CARSP49589 748 aaKnown RBP10.97□□□□□ -0.65
CHD4-202ENST00000430771 CRADDP78560 199 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 DPTQ07507 201 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 CBLBQ13191 982 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 SRSF5Q13243 272 aaKnown RBP10.97□□□□□ -0.65
CHD4-202ENST00000430771 ITGA9Q13797 1035 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 LRRC14Q15048 493 aa10.97□□□□□ -0.65
CHD4-202ENST00000430771 TRADDQ15628 312 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms