RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 XPOTO43592 962 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 NOBOXO60393 691 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TSPAN3O60637 253 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TNFSF15O95150 251 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 FAM107AO95990 144 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 WNT11O96014 354 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 CLEC2LP0C7M8 214 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 LIPCP11150 499 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 CD99P14209 185 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ACADSP16219 412 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 KRT4P19013 534 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 AOAHP28039 575 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 OXTRP30559 389 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 GNL1P36915 607 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ARRB1P49407 418 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 MANFP55145 182 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 RPL10AP62906 217 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 PRR5P85299 388 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 DBPQ10586 325 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 SHBQ15464 509 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TGIF1Q15583 401 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 UGCGQ16739 394 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 UPP1Q16831 310 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ISXQ2M1V0 245 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 CT83Q5H943 113 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 IFIT1BQ5T764 474 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 IRGCQ6NXR0 463 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TRIM65Q6PJ69 517 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 RPTNQ6XPR3 784 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 VASH2Q86V25 355 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 HOOK3Q86VS8 718 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 LINC00469Q8N7U9 141 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 AGBL5Q8NDL9 886 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 LILRB1Q8NHL6 650 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ABHD4Q8TB40 342 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 PSPC1Q8WXF1 523 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TSPAN17Q96FV3 270 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ATXN7L3BQ96GX2 97 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TEKT5Q96M29 485 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF577Q9BSK1 485 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 CARD6Q9BX69 1037 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ACE2Q9BYF1 805 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 SAMSN1Q9NSI8 373 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ERRFI1Q9UJM3 462 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 PNMA8BQ9ULN7 279 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 RPL26L1Q9UNX3 145 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TNNQ9UQP3 1299 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 R3HDM2Q9Y2K5 976 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 PRSS38A1L453 326 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 FRMD3A2A2Y4 597 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PMS2P1A4D2B8 440 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM150BA6NC51 233 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TBC1D3BA6NDS4 549 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 NUDT19A8MXV4 375 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 INO80B-WBP1J3KQ70 363 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 M0QX08 132 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 MATN2O00339 956 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 VILLO15195 856 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 KMOO15229 486 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC26A4O43511 780 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SOAT2O75908 522 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 MPIG6BO95866 241 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SYF2O95926 243 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 FGAP02671 866 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ARF4P18085 180 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 AGXTP21549 392 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 LPOP22079 712 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 NMT1P30419 496 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 MC4RP32245 332 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PIK3CAP42336 1068 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 MTNR1BP49286 362 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 BPIFB4P59827 614 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SRSF2Q01130 221 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 LAMTOR4Q0VGL1 99 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC9A5Q14940 896 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 NR1I3Q14994 352 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TAF12Q16514 161 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 ANKRD20A8PQ5CZ79 823 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 XKR3Q5GH77 459 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TOR2AQ5JU69 321 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PRAMEF14Q5SWL7 426 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 C10orf76Q5T2E6 689 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 DEPDC1Q5TB30 811 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 FYB2Q5VWT5 728 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TXNDC8Q6A555 127 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 GRAMD4Q6IC98 578 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 EPM2AIP1Q7L775 607 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 KCNK18Q7Z418 384 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 MON1AQ86VX9 555 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 MIB1Q86YT6 1006 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 GRAMD2AQ8IUY3 354 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 PHYKPLQ8IUZ5 450 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM57Q8N5G2 664 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 TTC9BQ8N6N2 239 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 RNF149Q8NC42 400 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 APPL2Q8NEU8 664 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 SVIPQ8NHG7 77 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 CPT1CQ8TCG5 803 aa5.59□□□□□ -1.51
ECHDC1-206ENST00000417628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms