RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 HAUS2Q9NVX0 235 aa26.28■■□□□ 1.8
VEGFA-207ENST00000413642 CAPN8A6NHC0 703 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 PPP1R12AO14974 1030 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-207ENST00000413642 CLDN7O95471 211 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 GP1BAP07359 652 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 MYCLP1P12525 358 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-207ENST00000413642 TGM2P21980 687 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 QPCTQ16769 361 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 RAET1GQ6H3X3 334 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 KDELC2Q7Z4H8 507 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 DAAM2Q86T65 1068 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 KATNAL2Q8IYT4 538 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 KYQ8NBH2 561 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 LACRTQ9GZZ8 138 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 BRD8Q9H0E9 1235 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 ABCG4Q9H172 646 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 EVA1BQ9NVM1 165 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 PADI4Q9UM07 663 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 GPR34Q9UPC5 381 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 RAXQ9Y2V3 346 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 PCDHB1Q9Y5F3 818 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 CACNA1BQ00975 2339 aa26.27■■□□□ 1.8
VEGFA-207ENST00000413642 SOD1P00441 154 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 KELP23276 732 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 POLD2P49005 469 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 STC1P52823 247 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 CDK3Q00526 305 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 TFDP2Q14188 446 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 HAUS1Q96CS2 278 aa26.26■■□□□ 1.79
VEGFA-207ENST00000413642 LUC7LQ9NQ29 371 aaKnown RBP26.26■■□□□ 1.79
VEGFA-207ENST00000413642 PHPT1Q9NRX4 125 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-207ENST00000413642 hCG_1818297A0A087WSY0 165 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 PRSS38A1L453 326 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 TNFRSF10CO14798 259 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 ZRANB2O95218 330 aaKnown RBP eCLIP26.25■■□□□ 1.794e-17■■□□□ 11.4
VEGFA-207ENST00000413642 CEACAM5P06731 702 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 CA4P22748 312 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 GALNT3Q14435 633 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 PRKD1Q15139 912 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-207ENST00000413642 GKN2Q86XP6 184 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 CCDC50Q8IVM0 306 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 RCOR2Q8IZ40 523 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 AP2M1Q96CW1 435 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 IMP4Q96G21 291 aaKnown RBP26.25■■□□□ 1.79
VEGFA-207ENST00000413642 HEMGNQ9BXL5 484 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 KCTD5Q9NXV2 234 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 NCKIPSDQ9NZQ3 722 aa26.25■■□□□ 1.79
VEGFA-207ENST00000413642 PTPN3P26045 913 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 GPR1P46091 355 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 RPIAP49247 311 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 RPL26P61254 145 aaKnown RBP26.24■■□□□ 1.79
VEGFA-207ENST00000413642 DPTQ07507 201 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 TFDP3Q5H9I0 405 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 DOK6Q6PKX4 331 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 LVRNQ6Q4G3 990 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 TAF8Q7Z7C8 310 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 TRIM74Q86UV6 250 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 TMEM139Q8IV31 216 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 CACTIN-AS1Q8N1I8 211 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 ARL10Q8N8L6 244 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 SPC24Q8NBT2 197 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 SPATA22Q8NHS9 363 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 SCG3Q8WXD2 468 aaKnown RBP26.24■■□□□ 1.79
VEGFA-207ENST00000413642 GLMNQ92990 594 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 TRIB3Q96RU7 358 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 HERPUD2Q9BSE4 406 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 RIOK2Q9BVS4 552 aaKnown RBP26.24■■□□□ 1.79
VEGFA-207ENST00000413642 FRMD8Q9BZ67 464 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-207ENST00000413642 CARS2Q9HA77 564 aaKnown RBP26.24■■□□□ 1.79
VEGFA-207ENST00000413642 DKK4Q9UBT3 224 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 RPL26L1Q9UNX3 145 aaKnown RBP26.24■■□□□ 1.79
VEGFA-207ENST00000413642 TMEM98Q9Y2Y6 226 aa26.24■■□□□ 1.79
VEGFA-207ENST00000413642 ANKRD66B4E2M5 251 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 PDE2AO00408 941 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 ZNF30P17039 623 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 NR2C2P49116 596 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 NAP1L1P55209 391 aaKnown RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 PCSK7Q16549 785 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 TEX44Q53QW1 395 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 NT5DC3Q86UY8 548 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 ZC3H18Q86VM9 953 aaKnown RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 FAM46DQ8NEK8 389 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 NXPE2Q96DL1 559 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 LYSMD1Q96S90 227 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 BAG1Q99933 345 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 MLPHQ9BV36 600 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 SLC25A51Q9H1U9 297 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 GLOD4Q9HC38 313 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 RABGEF1Q9UJ41 708 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 RALYQ9UKM9 306 aaKnown RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 AK5Q9Y6K8 562 aa26.23■■□□□ 1.79
VEGFA-207ENST00000413642 GOLGA4Q13439 2230 aaKnown RBP26.23■■□□□ 1.79
VEGFA-207ENST00000413642 A0A0U1RQJ8 604 aa26.22■■□□□ 1.79
VEGFA-207ENST00000413642 C1orf232A0A0U1RR37 186 aa26.22■■□□□ 1.79
VEGFA-207ENST00000413642 CSO75390 466 aaKnown RBP26.22■■□□□ 1.79
VEGFA-207ENST00000413642 MT-CYBP00156 380 aaPredicted RBP26.22■■□□□ 1.79
VEGFA-207ENST00000413642 PIRTP0C851 137 aa26.22■■□□□ 1.79
VEGFA-207ENST00000413642 TEAD1P28347 426 aa26.22■■□□□ 1.79
VEGFA-207ENST00000413642 WASHC5Q12768 1159 aa26.22■■□□□ 1.79
VEGFA-207ENST00000413642 EXD1Q8NHP7 514 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms