RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ANKDD1AQ495B1 522 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 CYBRD1Q53TN4 286 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 CCNYL2Q5T2Q4 361 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 FAM117BQ6P1L5 589 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 KCTD8Q6ZWB6 473 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 LRRC49Q8IUZ0 686 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 DDIASQ8IXT1 998 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 PCED1BQ96HM7 432 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 CATSPERBQ9H7T0 1116 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 IL1RL2Q9HB29 575 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 RBM22Q9NW64 420 aaKnown RBP eCLIP17.63■□□□□ 0.41
SDCBP-202ENST00000413219 KCNH4Q9UQ05 1017 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
SDCBP-202ENST00000413219 TCRBV5S2A0A599 114 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 H0YAE9 185 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 EI24O14681 340 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TPST1O60507 370 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 VPS4BO75351 444 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 MMP3P08254 477 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 JUNBP17275 347 aaPredicted RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 MRPL19P49406 292 aaKnown RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 WNT3AP56704 352 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 KDELC1Q6UW63 502 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TMEM26Q6ZUK4 368 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 CILP2Q8IUL8 1156 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 DCP1BQ8IZD4 617 aaKnown RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SCML4Q8N228 414 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TWIST2Q8WVJ9 160 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SLC39A8Q9C0K1 460 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 KATNBL1Q9H079 304 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 CCDC68Q9H2F9 335 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 ATP13A1Q9HD20 1204 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TMEM30AQ9NV96 361 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 GNPTGQ9UJJ9 305 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 PAIP2BQ9ULR5 123 aaKnown RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF711Q9Y462 761 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SLC30A1Q9Y6M5 507 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TYW5A2RUC4 315 aaKnown RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 AZIN1O14977 448 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 CDK14O94921 469 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 LBPP18428 481 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TMBIM6P55061 237 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SH3BP2P78314 561 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 ADARB1P78563 741 aaKnown RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SNX17Q15036 470 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 CYP51A1Q16850 503 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 KANK2Q63ZY3 851 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
SDCBP-202ENST00000413219 BLOC1S3Q6QNY0 202 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 DCDC5Q6ZRR9 648 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 BEND5Q7L4P6 421 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 PDPRQ8NCN5 879 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TMEM125Q96AQ2 219 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SMARCD1Q96GM5 515 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TRIM62Q9BVG3 475 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 MFSD1Q9H3U5 465 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 SLC52A3Q9NQ40 469 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 ANAPC2Q9UJX6 822 aa17.62■□□□□ 0.41
SDCBP-202ENST00000413219 TMEM221A6NGB7 291 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 SOBPA7XYQ1 873 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 BOLA2-SMG1P6H3BVE0 249 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 PIP5K1BO14986 540 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 BAIAP3O94812 1187 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 IGLV3-25P01717 112 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 HOXB8P17481 243 aaPredicted RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 KCNC1P48547 511 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 SERPINH1P50454 418 aaKnown RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 GRIK2Q13002 908 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 TGFBIQ15582 683 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 FSCN1Q16658 493 aaKnown RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 EML3Q32P44 896 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 AASDHQ4L235 1098 aaPredicted RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 FGD3Q5JSP0 725 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 BRMS1LQ5PSV4 323 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 GPR158Q5T848 1215 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 MANEALQ5VSG8 457 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 AFMIDQ63HM1 303 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 ANKRD26P1Q6NSI1 321 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 TMEM207Q6UWW9 146 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 RAB44Q7Z6P3 723 aaPredicted RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 CTU1Q7Z7A3 348 aaKnown RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 ANKRD23Q86SG2 305 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 OR13F1Q8NGS4 319 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 DQX1Q8TE96 717 aaKnown RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 OSCP1Q8WVF1 389 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 SENP8Q96LD8 212 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 SLC25A51Q9H1U9 297 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 CSNK1G1Q9HCP0 422 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 BLOC1S6Q9UL45 172 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 IPPQ9Y573 584 aa17.61■□□□□ 0.41
SDCBP-202ENST00000413219 BRCA1P38398 1863 aaKnown RBP17.61■□□□□ 0.41
SDCBP-202ENST00000413219 MYBPHLA2RUH7 354 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 ESRRBO95718 433 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 LDLRP01130 860 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 TSPAN8P19075 237 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 UGT1A1P22309 533 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 UGT1A4P22310 534 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 UGT1A3P35503 534 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms