RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SUSD6Q92537 303 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 CABS1Q96KC9 395 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 NECTIN4Q96NY8 510 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 MCCC1Q96RQ3 725 aaPredicted RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 LYSMD1Q96S90 227 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 OMDQ99983 421 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 TRMT61BQ9BVS5 477 aaKnown RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 ZFYVE1Q9HBF4 777 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 EPS15L1Q9UBC2 864 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 IL36AQ9UHA7 158 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 PPIL1Q9Y3C6 166 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 PKP3Q9Y446 797 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 TICRRQ7Z2Z1 1910 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 TCF20Q9UGU0 1960 aaKnown RBP14.05□□□□□ -0.16
GPNMB-203ENST00000409458 EYSQ5T1H1 3165 aa14.05□□□□□ -0.16
GPNMB-203ENST00000409458 ANTXRLA6NF34 631 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 A8MX80 341 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 NDUFAB1O14561 156 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 VIMP08670 466 aaKnown RBP14.04□□□□□ -0.16
GPNMB-203ENST00000409458 SLC35E2BP0CK96 405 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 HLA-EP13747 358 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 POLD2P49005 469 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 RGS19P49795 217 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 TAS2R39P59534 338 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 RAB10P61026 200 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 XIAPP98170 497 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 HTR4Q13639 388 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 ARSIQ5FYB1 569 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 PSAPL1Q6NUJ1 521 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 CRTC1Q6UUV9 634 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 RAPH1Q70E73 1250 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 USP45Q70EL2 814 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 MTSS1LQ765P7 747 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 OLFM1Q99784 485 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF358Q9NW07 568 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 DCDC2Q9UHG0 476 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 CD207Q9UJ71 328 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 PLA2G4CQ9UP65 541 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 TSPAN11A1L157 253 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 TBC1D3BA6NDS4 549 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 H3BQ06 376 aaPredicted RBP14.04□□□□□ -0.16
GPNMB-203ENST00000409458 GPR39O43194 453 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 STMN1P16949 149 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 LHCGRP22888 699 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 POU4F1Q01851 419 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF234Q14588 700 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 INSCQ1MX18 579 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 ITPRIPL2Q3MIP1 535 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 ZRANB3Q5FWF4 1079 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 HECTD2Q5U5R9 776 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 LRRC66Q68CR7 880 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF549Q6P9A3 640 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 KYAT3Q6YP21 454 aaKnown RBP14.04□□□□□ -0.16
GPNMB-203ENST00000409458 RGS9BPQ6ZS82 235 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 SPNS2Q8IVW8 549 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 PIANPQ8IYJ0 282 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 SCRN2Q96FV2 425 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 MECRQ9BV79 373 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 C1QTNF1Q9BXJ1 281 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 FAM96AQ9H5X1 160 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 FGFR1OP2Q9NVK5 253 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 TMEM216Q9P0N5 145 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 COLQQ9Y215 455 aaPredicted RBP14.04□□□□□ -0.16
GPNMB-203ENST00000409458 CRYL1Q9Y2S2 319 aa14.04□□□□□ -0.16
GPNMB-203ENST00000409458 A0A1W2PPC1 479 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 A0A1W2PQ67 120 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 SOX1O00570 391 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 GAPDHSO14556 408 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 PLIN3O60664 434 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 KAT7O95251 611 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 PROCP04070 461 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 GSTA1P08263 222 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 PMLP29590 882 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 EIF2DP41214 584 aaKnown RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 SOX9P48436 509 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 IRX4P78413 519 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 HNRNPA1L2Q32P51 320 aaKnown RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 TAF1BQ53T94 588 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 BRAT1Q6PJG6 821 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 TPRG1Q6ZUI0 275 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 SDCCAG8Q86SQ7 713 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 KDM1BQ8NB78 822 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 LRRC8CQ8TDW0 803 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 LPGAT1Q92604 370 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 OSBPL1AQ9BXW6 950 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 BRD9Q9H8M2 597 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 INTS10Q9NVR2 710 aaKnown RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 B4GALT6Q9UBX8 382 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 HCN2Q9UL51 889 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 ANKRD6Q9Y2G4 727 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 MTF2Q9Y483 593 aaPredicted RBP14.03□□□□□ -0.16
GPNMB-203ENST00000409458 COL4A2P08572 1712 aa14.03□□□□□ -0.16
GPNMB-203ENST00000409458 EDDM13A0A1B0GTR0 161 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 GRXCR2A6NFK2 248 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 ERICH4A6NGS2 130 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 ANHXE9PGG2 379 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 BPIP17213 487 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 CRABP2P29373 138 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms