RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 GDPD4Q6W3E5 623 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 USP45Q70EL2 814 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 SDCCAG8Q86SQ7 713 aaPredicted RBP21.01■□□□□ 0.95
TPM1-208ENST00000404484 CILP2Q8IUL8 1156 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 TTC30BQ8N4P2 665 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 DCLK2Q8N568 766 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 OR4K2Q8NGD2 314 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 OR13C4Q8NGS5 318 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 SORCS1Q8WY21 1168 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 CDKN2AIPNLQ96HQ2 116 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 GPR22Q99680 433 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 CCDC134Q9H6E4 229 aa21.01■□□□□ 0.95
TPM1-208ENST00000404484 KIAA1549LQ6ZVL6 1849 aa21■□□□□ 0.95
TPM1-208ENST00000404484 TTC34A8MYJ7 566 aa21■□□□□ 0.95
TPM1-208ENST00000404484 TPP1O14773 563 aa21■□□□□ 0.95
TPM1-208ENST00000404484 GOT2P00505 430 aaKnown RBP21■□□□□ 0.95
TPM1-208ENST00000404484 ALDOAP04075 364 aaKnown RBP21■□□□□ 0.95
TPM1-208ENST00000404484 TARSP26639 723 aaKnown RBP21■□□□□ 0.95
TPM1-208ENST00000404484 TYK2P29597 1187 aa21■□□□□ 0.95
TPM1-208ENST00000404484 RPA3P35244 121 aaPredicted RBP21■□□□□ 0.95
TPM1-208ENST00000404484 HMGCLP35914 325 aa21■□□□□ 0.95
TPM1-208ENST00000404484 TMPRSS15P98073 1019 aa21■□□□□ 0.95
TPM1-208ENST00000404484 CTBP1Q13363 440 aa21■□□□□ 0.95
TPM1-208ENST00000404484 FZD5Q13467 585 aa21■□□□□ 0.95
TPM1-208ENST00000404484 HHATQ5VTY9 493 aa21■□□□□ 0.95
TPM1-208ENST00000404484 BRAT1Q6PJG6 821 aa21■□□□□ 0.95
TPM1-208ENST00000404484 PTAR1Q7Z6K3 402 aaPredicted RBP21■□□□□ 0.95
TPM1-208ENST00000404484 DENND6AQ8IWF6 608 aa21■□□□□ 0.95
TPM1-208ENST00000404484 ZNF687Q8N1G0 1237 aa21■□□□□ 0.95
TPM1-208ENST00000404484 PHTF2Q8N3S3 785 aa21■□□□□ 0.95
TPM1-208ENST00000404484 OR4L1Q8NH43 312 aa21■□□□□ 0.95
TPM1-208ENST00000404484 DENND1AQ8TEH3 1009 aa21■□□□□ 0.95
TPM1-208ENST00000404484 FAM3CQ92520 227 aa21■□□□□ 0.95
TPM1-208ENST00000404484 LYSMD1Q96S90 227 aa21■□□□□ 0.95
TPM1-208ENST00000404484 NELL2Q99435 816 aa21■□□□□ 0.95
TPM1-208ENST00000404484 C8orf33Q9H7E9 229 aaPredicted RBP21■□□□□ 0.95
TPM1-208ENST00000404484 CATSPERZQ9NTU4 200 aa21■□□□□ 0.95
TPM1-208ENST00000404484 POLR3BQ9NW08 1133 aaPredicted RBP21■□□□□ 0.95
TPM1-208ENST00000404484 DLGAP2Q9P1A6 1054 aa21■□□□□ 0.95
TPM1-208ENST00000404484 CORO1CQ9ULV4 474 aaPredicted RBP21■□□□□ 0.95
TPM1-208ENST00000404484 PPIL1Q9Y3C6 166 aa21■□□□□ 0.95
TPM1-208ENST00000404484 CCDC162PA2VCL2 907 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 SPECC1L-ADORA2AF8WAN1 911 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 AURKAO14965 403 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 PFDN6O15212 129 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 CD3EAPO15446 510 aaKnown RBP20.99■□□□□ 0.95
TPM1-208ENST00000404484 AHSGP02765 367 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 MPOP05164 745 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 UGT2B4P06133 528 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 CTPS1P17812 591 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 CRHR1P34998 444 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 OPRD1P41143 372 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 MAGEA12P43365 314 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 LEPRP48357 1165 aaKnown RBP20.99■□□□□ 0.95
TPM1-208ENST00000404484 NEK3P51956 506 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 FNDC3BQ53EP0 1204 aaKnown RBP20.99■□□□□ 0.95
TPM1-208ENST00000404484 TXNDC11Q6PKC3 985 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 TAX1BP1Q86VP1 789 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 HCAR2Q8TDS4 363 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 OSBPL6Q9BZF3 934 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 PCMTD2Q9NV79 361 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 IL36AQ9UHA7 158 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 NDRG2Q9UN36 371 aaKnown RBP20.99■□□□□ 0.95
TPM1-208ENST00000404484 COL4A2P08572 1712 aa20.99■□□□□ 0.95
TPM1-208ENST00000404484 KMT2EQ8IZD2 1858 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 EDDM13A0A1B0GTR0 161 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 TBC1D3BA6NDS4 549 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 PRRT4C9JH25 899 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 H7C0S8 307 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 BUD23O43709 281 aaKnown RBP20.98■□□□□ 0.95
TPM1-208ENST00000404484 SLC4A1P02730 911 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 CTHP32929 405 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 GRIA2P42262 883 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 MPP1Q00013 466 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 PPARDQ03181 441 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 FASTKD1Q53R41 847 aaKnown RBP20.98■□□□□ 0.95
TPM1-208ENST00000404484 RALGPS2Q86X27 583 aaPredicted RBP20.98■□□□□ 0.95
TPM1-208ENST00000404484 CHST14Q8NCH0 376 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 TCP10LQ8TDR4 215 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 ATXN7L3BQ96GX2 97 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 ZFYVE1Q9HBF4 777 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 SNX15Q9NRS6 342 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 VPS9D1Q9Y2B5 631 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 MRPS17Q9Y2R5 130 aaKnown RBP20.98■□□□□ 0.95
TPM1-208ENST00000404484 MTO1Q9Y2Z2 717 aaKnown RBP20.98■□□□□ 0.95
TPM1-208ENST00000404484 CACNA1IQ9P0X4 2223 aa20.98■□□□□ 0.95
TPM1-208ENST00000404484 C1orf232A0A0U1RR37 186 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 GLRA3O75311 464 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 ASMTLO95671 621 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 APODP05090 189 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 ALPIP09923 528 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 LRRC14Q15048 493 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 INSCQ1MX18 579 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 AARS2Q5JTZ9 985 aaKnown RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 LYSMD3Q7Z3D4 306 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 CHFRQ96EP1 664 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 SCRN2Q96FV2 425 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 MCCC1Q96RQ3 725 aaPredicted RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 TCF12Q99081 682 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 EPN3Q9H201 632 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms