RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RFLNAQ6ZTI6 216 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 TMC3Q7Z5M5 1100 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 PTAR1Q7Z6K3 402 aaPredicted RBP19.18■□□□□ 0.66
HOXA9-202ENST00000396345 RAVER1Q8IY67 606 aaKnown RBP19.18■□□□□ 0.66
HOXA9-202ENST00000396345 NRSN1Q8IZ57 195 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 OR13H1Q8NG92 308 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 ZDHHC5Q9C0B5 715 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 PKD2L2Q9NZM6 624 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 PCYOX1Q9UHG3 505 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 NEU2Q9Y3R4 380 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 PTPRZ1P23471 2315 aaPredicted RBP19.18■□□□□ 0.66
HOXA9-202ENST00000396345 KNL1Q8NG31 2342 aa19.18■□□□□ 0.66
HOXA9-202ENST00000396345 PCDH15Q96QU1 1955 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.17■□□□□ 0.66
HOXA9-202ENST00000396345 LNP1A1A4G5 178 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 AURKAO14965 403 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 URI1O94763 535 aaPredicted RBP19.17■□□□□ 0.66
HOXA9-202ENST00000396345 SUN1O94901 812 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 APRTP07741 180 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 CTSKP43235 329 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 RABIFP47224 123 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 SPINT3P49223 89 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 PPP1R7Q15435 360 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 PLA2G15Q8NCC3 412 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 EID2BQ96D98 161 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 RUNDC3BQ96NL0 473 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 GTPBP2Q9BX10 602 aaKnown RBP19.17■□□□□ 0.66
HOXA9-202ENST00000396345 ABCG8Q9H221 673 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 CD84Q9UIB8 345 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 SNX11Q9Y5W9 270 aa19.17■□□□□ 0.66
HOXA9-202ENST00000396345 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.17■□□□□ 0.66
HOXA9-202ENST00000396345 RGSL1A5PLK6 1076 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 TOR1BO14657 336 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 ATXN3P54252 364 aaPredicted RBP19.16■□□□□ 0.66
HOXA9-202ENST00000396345 NXPH1P58417 271 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 PFN3P60673 137 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 MTM1Q13496 603 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 INPP5AQ14642 412 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 ESRP1Q6NXG1 681 aaKnown RBP19.16■□□□□ 0.66
HOXA9-202ENST00000396345 PNCKQ6P2M8 343 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 IL27RAQ6UWB1 636 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 PPP1R21Q6ZMI0 780 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 KDM7AQ6ZMT4 941 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 ZNF765Q7L2R6 523 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 GLT6D1Q7Z4J2 308 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 DCP2Q8IU60 420 aaKnown RBP19.16■□□□□ 0.66
HOXA9-202ENST00000396345 KIAA2013Q8IYS2 634 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 TTC30BQ8N4P2 665 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 SLCO2A1Q92959 643 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 AP2M1Q96CW1 435 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 GDF3Q9NR23 364 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 EIF2B3Q9NR50 452 aaKnown RBP19.16■□□□□ 0.66
HOXA9-202ENST00000396345 RAD18Q9NS91 495 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 CDC23Q9UJX2 597 aa19.16■□□□□ 0.66
HOXA9-202ENST00000396345 HMGCLP35914 325 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 PTGIRP43119 386 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 TERF1P54274 439 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 YPEL5P62699 121 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 DPTQ07507 201 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 CDH17Q12864 832 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 MSLNQ13421 630 aaPredicted RBP19.15■□□□□ 0.66
HOXA9-202ENST00000396345 NLRP8Q86W28 1048 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 SPATS2Q86XZ4 545 aaKnown RBP19.15■□□□□ 0.66
HOXA9-202ENST00000396345 DNAAF3Q8N9W5 541 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 SPATA4Q8NEY3 305 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 OR52K1Q8NGK4 314 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 BRSK1Q8TDC3 778 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 SCAMP4Q969E2 229 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 APOOQ9BUR5 198 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 EDEM2Q9BV94 578 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 FAM83DQ9H4H8 585 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 RXFP3Q9NSD7 469 aa19.15■□□□□ 0.66
HOXA9-202ENST00000396345 TP53BP1Q12888 1972 aaPredicted RBP19.15■□□□□ 0.66
HOXA9-202ENST00000396345 C2orf81A6NN90 581 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 K7ESM1 405 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 TSHRP16473 764 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 TPH1P17752 444 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 TPSB2P20231 275 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 DR1Q01658 176 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 CKAP4Q07065 602 aaKnown RBP19.14■□□□□ 0.65
HOXA9-202ENST00000396345 PDE1CQ14123 709 aaPredicted RBP19.14■□□□□ 0.65
HOXA9-202ENST00000396345 TAF1AQ15573 450 aaPredicted RBP19.14■□□□□ 0.65
HOXA9-202ENST00000396345 TPSAB1Q15661 275 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 HLA-BQ31612 363 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 RAET1GQ6H3X3 334 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 SLC22A18ASQ8N1D0 253 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 PELI3Q8N2H9 469 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 KIF18AQ8NI77 898 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 KRT12Q99456 494 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 RIOK2Q9BVS4 552 aaKnown RBP19.14■□□□□ 0.65
HOXA9-202ENST00000396345 CDH19Q9H159 772 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 BPIFA1Q9NP55 256 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 GPR27Q9NS67 375 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 PIH1D1Q9NWS0 290 aaKnown RBP19.14■□□□□ 0.65
HOXA9-202ENST00000396345 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.14■□□□□ 0.65
HOXA9-202ENST00000396345 OR1A2Q9Y585 309 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 ARL5AQ9Y689 179 aa19.14■□□□□ 0.65
HOXA9-202ENST00000396345 BUD23O43709 281 aaKnown RBP19.13■□□□□ 0.65
HOXA9-202ENST00000396345 CRTAMO95727 393 aa19.13■□□□□ 0.65
HOXA9-202ENST00000396345 CER1O95813 267 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms