RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PIM3Q86V86 326 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 FAM47BQ8NA70 645 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 HM13Q8TCT9 377 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 CASP10Q92851 521 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 BEGAINQ9BUH8 593 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 SLC25A51Q9H1U9 297 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 DOCK4Q8N1I0 1966 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 hCG_2014768A0A024R1R8 64 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 A0A0J9YVX5 310 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 A0A0J9YYE9 177 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 A0A1W2PQ45 241 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 A0A1W2PQY0 241 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 SAC3D1A6NKF1 404 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 NR5A2O00482 541 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 DLGAP1O14490 977 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 STAMBPO95630 424 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 PEX11BO96011 259 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 CCR1P32246 355 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 CDH13P55290 713 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 NME5P56597 212 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 MGAT3Q09327 533 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 MYBPC3Q14896 1274 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 BEND5Q7L4P6 421 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 RTL3Q8N8U3 475 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 PCYOX1LQ8NBM8 494 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 ZUFSPQ96AP4 578 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 PTERQ96BW5 349 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 NOL6Q9H6R4 1146 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 AGO3Q9H9G7 860 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 CLK4Q9HAZ1 481 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 IL1RL2Q9HB29 575 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 CCM2LQ9NUG4 571 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 FAM105AQ9NUU6 356 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 GIMAP2Q9UG22 337 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 SLC8A2Q9UPR5 921 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 HEMK1Q9Y5R4 338 aaPredicted RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 TRPV2Q9Y5S1 764 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 E9PAM4 449 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 BMP10O95393 424 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 S1PR4O95977 384 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 SCNN1GP51170 649 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 ARSDP51689 593 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 PRMT2P55345 433 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 DCTN2Q13561 401 aaKnown RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 IHHQ14623 411 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 KIF19Q2TAC6 998 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 GALNT7Q86SF2 657 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 EPHX4Q8IUS5 362 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 IMP4Q96G21 291 aaKnown RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 GLT1D1Q96MS3 346 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 TMEM209Q96SK2 561 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 IRAK4Q9NWZ3 460 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 OSER1Q9NX31 292 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 MARCH4Q9P2E8 410 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 ABCD2Q9UBJ2 740 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 CIDEBQ9UHD4 219 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 PTGDR2Q9Y5Y4 395 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 ZFC3H1O60293 1989 aaKnown RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 OR51F1A6NGY5 319 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 BBIP1A8MTZ0 92 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 MOCS2O96007 188 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 UGT1A6P19224 532 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 MAXP61244 160 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 HERVK_113P63132 956 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 SH3BP2P78314 561 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 PRAMEP78395 509 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 PLOD1Q02809 727 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 PAN2Q504Q3 1202 aaKnown RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 GABPB2Q8TAK5 448 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 EXT2Q93063 718 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 ERVK-6Q9BXR3 956 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 SMOC2Q9H3U7 446 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 NT5MQ9NPB1 228 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 POLR3BQ9NW08 1133 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 NUDT5Q9UKK9 219 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 DNAJC15Q9Y5T4 150 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 HS3ST4Q9Y661 456 aa18.34■□□□□ 0.53
PCDHA1-202ENST00000394633 M0QZ92 97 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 PPP6CO00743 305 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 PAPSS2O95340 614 aaPredicted RBP18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 GNAO1P09471 354 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 CAPN3P20807 821 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 CD86P42081 329 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 YBX1P67809 324 aaKnown RBP18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 NFKB2Q00653 900 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 UPP1Q16831 310 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 TBCELQ5QJ74 424 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 LRRTM3Q86VH5 581 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 CLYBLQ8N0X4 340 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 MFSD2AQ8NA29 543 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 OR6P1Q8NGX9 317 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 DIS3LQ8TF46 1054 aaKnown RBP18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 HDAC10Q969S8 669 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 PKMYT1Q99640 499 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 ACBD6Q9BR61 282 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 TRIM62Q9BVG3 475 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 ABCC13Q9NSE7 274 aa18.33■□□□□ 0.53
PCDHA1-202ENST00000394633 SMOXQ9NWM0 555 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms