RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ACOX1Q15067 660 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FBXO43Q4G163 708 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PRAMEF8Q5VWM4 474 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TMEM198Q66K66 360 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 INTS5Q6P9B9 1019 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 ZSWIM9Q86XI8 627 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 THEM5Q8N1Q8 247 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SLAMF9Q96A28 289 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TMEM176AQ96HP8 235 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 LINC00615Q96LM1 132 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 SFXN2Q96NB2 322 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FCRL4Q96PJ5 515 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SEPHS2Q99611 448 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM213AQ9BRX8 229 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 INPP5KQ9BT40 448 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PHF7Q9BWX1 381 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 BTBD2Q9BX70 525 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 IKZF4Q9H2S9 585 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MRPS18AQ9NVS2 196 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 MARCH4Q9P2E8 410 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 HESX1Q9UBX0 185 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 A4GNTQ9UNA3 340 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 H3BMM5 538 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PRSS23O95084 383 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SLC6A2P23975 617 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TBXAS1P24557 533 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 ADAM17P78536 824 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ATP2C1P98194 919 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 PLA2G4FQ68DD2 849 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FCRL6Q6DN72 434 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 EFCAB12Q6NXP0 572 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PSRC1Q6PGN9 363 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 GLB1LQ6UWU2 654 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TMEM26Q6ZUK4 368 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PATL1Q86TB9 770 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 PLXDC1Q8IUK5 500 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MCEMP1Q8IX19 187 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PLA2G15Q8NCC3 412 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM46BQ96A09 425 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ULK4Q96C45 1275 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 THOC3Q96J01 351 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 RPGRIP1Q96KN7 1286 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CAMK1GQ96NX5 476 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CXorf36Q9H7Y0 433 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 GPR108Q9NPR9 543 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 NDFIP2Q9NV92 336 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ETAA1Q9NY74 926 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FBLN5Q9UBX5 448 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TRPS1Q9UHF7 1281 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MYO6Q9UM54 1294 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 CCDC151A5D8V7 595 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 H0Y8G0 127 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 HS3ST1O14792 307 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 MAGEB2O15479 319 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 OGG1O15527 345 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 NMT2O60551 498 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 CALCAP01258 141 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 TNNI1P19237 187 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 TRIM21P19474 475 aaKnown RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 WASP42768 502 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 HNRNPFP52597 415 aaKnown RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 IRX1P78414 480 aaPredicted RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 RTP5Q14D33 572 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 LY6KQ17RY6 165 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 CD300EQ496F6 205 aaPredicted RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 TCTE1Q5JU00 501 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 GLDNQ6ZMI3 551 aaPredicted RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 C16orf62Q7Z3J2 963 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 FBXW8Q8N3Y1 598 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 PTGR2Q8N8N7 351 aaPredicted RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 OR14L1PQ8NHC6 308 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 PDCD6IPQ8WUM4 868 aaKnown RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 GFM2Q969S9 779 aaKnown RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 GIMAP5Q96F15 307 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 NRBF2Q96F24 287 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 TSPAN17Q96FV3 270 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 ZDHHC12Q96GR4 267 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 FYTTD1Q96QD9 318 aaKnown RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 DRC3Q9H069 523 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 FN3KQ9H479 309 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 SIRT3Q9NTG7 399 aaPredicted RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 TBC1D13Q9NVG8 400 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 DNAJC17Q9NVM6 304 aaKnown RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 ZNF148Q9UQR1 794 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 KCNK6Q9Y257 313 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 NFS1Q9Y697 457 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 UNC80Q8N2C7 3258 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 PASKQ96RG2 1323 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 C2orf92A0A1B0GVN3 265 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 ARHGEF35A5YM69 484 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 KRT86O43790 486 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 WDR47O94967 919 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 PDGFBP01127 241 aaPredicted RBP3.56□□□□□ -1.84
XRN1-202ENST00000392981 SFTPCP11686 197 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 PRDX6P30041 224 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 IL13P35225 146 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 CYP2J2P51589 502 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 AIF1P55008 147 aa3.56□□□□□ -1.84
XRN1-202ENST00000392981 IL13RA1P78552 427 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms