RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 KDM7AQ6ZMT4 941 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 Q6ZVL8 140 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
GGPS1-203ENST00000391855 HID1Q8IV36 788 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 RBFAQ8N0V3 343 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 TTC13Q8NBP0 860 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 PLA2G15Q8NCC3 412 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 OR56A4Q8NGH8 313 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ACTL9Q8TC94 416 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 LMX1AQ8TE12 382 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 SCG3Q8WXD2 468 aaKnown RBP12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ALG3Q92685 438 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 FUBP1Q96AE4 644 aaKnown RBP12.66□□□□□ -0.38
GGPS1-203ENST00000391855 RBM15Q96T37 977 aaKnown RBP eCLIP12.66□□□□□ -0.38
GGPS1-203ENST00000391855 HEMGNQ9BXL5 484 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 CEP41Q9BYV8 373 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 CDH19Q9H159 772 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 RAD18Q9NS91 495 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 PKD2L2Q9NZM6 624 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 FAM153AQ9UHL3 310 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 KLF15Q9UIH9 416 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 OR1A2Q9Y585 309 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 C1orf232A0A0U1RR37 186 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 H7C0C1 242 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 TNFP01375 233 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
GGPS1-203ENST00000391855 ANXA6P08133 673 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 CKMT1AP12532 417 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 CTSEP14091 401 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 GPR1P46091 355 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 ATP5OP48047 213 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 RPIAP49247 311 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 E2F1Q01094 437 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 OTUD4Q01804 1114 aaKnown RBP12.65□□□□□ -0.38
GGPS1-203ENST00000391855 ITPRIPL1Q6GPH6 555 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 TMPRSS12Q86WS5 348 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 HEATR4Q86WZ0 1026 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 APOLD1Q96LR9 279 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 PPP1R2P1Q96PQ5 205 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 FCRL5Q96RD9 977 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 TRIB3Q96RU7 358 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 TEX101Q9BY14 249 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 KLK13Q9UKR3 277 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 DOLKQ9UPQ8 538 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
GGPS1-203ENST00000391855 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 NDST3O95803 873 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 TOP3BO95985 862 aaKnown RBP12.64□□□□□ -0.39
GGPS1-203ENST00000391855 EPOP01588 193 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 GP1BAP07359 652 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 RBP3P10745 1247 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 PYGMP11217 842 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 NFKB1P19838 968 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 CDK3Q00526 305 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 PTSQ03393 145 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 DNAJC3Q13217 504 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 MPP3Q13368 585 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 SMAD1Q15797 465 aaKnown RBP12.64□□□□□ -0.39
GGPS1-203ENST00000391855 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 PID1Q7Z2X4 250 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 LRRC8AQ8IWT6 810 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 ZNF567Q8N184 647 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 CACTIN-AS1Q8N1I8 211 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 HES6Q96HZ4 224 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 ALS2CR12Q96Q35 445 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 ABCG8Q9H221 673 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 MAGEE1Q9HCI5 957 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 NFKBIL1Q9UBC1 381 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-203ENST00000391855 LRP4O75096 1905 aa12.64□□□□□ -0.39
GGPS1-203ENST00000391855 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GOLGA6BA6NDN3 693 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 TMEM202A6NGA9 273 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 DDX3YO15523 660 aaKnown RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 CLDN7O95471 211 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 FTCDO95954 541 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 SPINK2P20155 84 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 CD68P34810 354 aaPredicted RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 SPINT3P49223 89 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 EIF3EP60228 445 aaKnown RBP12.63□□□□□ -0.39
GGPS1-203ENST00000391855 PEX6Q13608 980 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 GALNT3Q14435 633 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 PCSK7Q16549 785 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 CDKN3Q16667 212 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 CCDC157Q569K6 752 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 DHRS13Q6UX07 377 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 UNQ6494/PRO21346Q6UXR6 183 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
GGPS1-203ENST00000391855 OR1E3Q8WZA6 343 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms