RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 CHN1P15882 459 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 LHCGRP22888 699 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 TFF2Q03403 129 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 SEMA3AQ14563 771 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 FASTKD1Q53R41 847 aaKnown RBP26.8■■□□□ 1.88
MSX1-201ENST00000382723 MRNIPQ6NTE8 343 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 KIAA0408Q6ZU52 694 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 ACVR1CQ8NER5 493 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 FAM96AQ9H5X1 160 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 C8orf33Q9H7E9 229 aaPredicted RBP26.8■■□□□ 1.88
MSX1-201ENST00000382723 PCDH12Q9NPG4 1184 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 DKK3Q9UBP4 350 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 KIR2DL1P43626 348 aaPredicted RBP26.79■■□□□ 1.88
MSX1-201ENST00000382723 CD151P48509 253 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 GUCY1A3Q02108 690 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 C2orf27AQ580R0 203 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 CNSTQ6PJW8 725 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 TIFABQ6ZNK6 161 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 PARS2Q7L3T8 475 aaKnown RBP26.79■■□□□ 1.88
MSX1-201ENST00000382723 MMAAQ8IVH4 418 aaKnown RBP26.79■■□□□ 1.88
MSX1-201ENST00000382723 LMNTD2Q8IXW0 634 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 TMIEQ8NEW7 156 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 CAB39LQ9H9S4 337 aa26.79■■□□□ 1.88
MSX1-201ENST00000382723 IL9P15248 144 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 SAT1P21673 171 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 PEX6Q13608 980 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 ZRANB3Q5FWF4 1079 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 SH2D5Q6ZV89 423 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 GPR150Q8NGU9 434 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 MLXIPLQ9NP71 852 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 PCMTD2Q9NV79 361 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 SLC39A10Q9ULF5 831 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 FAM47DPA6NHR8 397 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 LEPRP48357 1165 aaKnown RBP26.78■■□□□ 1.88
MSX1-201ENST00000382723 CDKN1CP49918 316 aaPredicted RBP26.78■■□□□ 1.88
MSX1-201ENST00000382723 DNAJC3Q13217 504 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 CMC1Q7Z7K0 106 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 SDCCAG8Q86SQ7 713 aaPredicted RBP26.78■■□□□ 1.88
MSX1-201ENST00000382723 BANPQ8N9N5 519 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 HCAR2Q8TDS4 363 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 PBXIP1Q96AQ6 731 aa26.78■■□□□ 1.88
MSX1-201ENST00000382723 SMG5Q9UPR3 1016 aaKnown RBP26.78■■□□□ 1.88
MSX1-201ENST00000382723 TYROBPO43914 113 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 S1PR4O95977 384 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 PMLP29590 882 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 TYK2P29597 1187 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 RPA3P35244 121 aaPredicted RBP26.77■■□□□ 1.88
MSX1-201ENST00000382723 PTSQ03393 145 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 FAM151BQ6UXP7 276 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 DSG4Q86SJ6 1040 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 ARRDC3Q96B67 414 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 GPR22Q99680 433 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 SLC13A1Q9BZW2 595 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 H7C0S8 307 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 PRPF4O43172 522 aaKnown RBP eCLIP26.77■■□□□ 1.88
MSX1-201ENST00000382723 CHRM1P11229 460 aaPredicted RBP26.77■■□□□ 1.88
MSX1-201ENST00000382723 CYP2A6P11509 494 aaPredicted RBP26.77■■□□□ 1.88
MSX1-201ENST00000382723 BPIP17213 487 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 FOXN2P32314 431 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 PSMD8P48556 350 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 XIAPP98170 497 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 SLC18A2Q05940 514 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 ENPP2Q13822 863 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 ARHGEF7Q14155 803 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 TMEM196Q5HYL7 178 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 GPATCH11Q8N954 259 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 ALKBH8Q96BT7 664 aaKnown RBP26.77■■□□□ 1.88
MSX1-201ENST00000382723 SSU72Q9NP77 194 aaKnown RBP26.77■■□□□ 1.88
MSX1-201ENST00000382723 SNX15Q9NRS6 342 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 NKIRAS1Q9NYS0 192 aa26.77■■□□□ 1.88
MSX1-201ENST00000382723 PLK4O00444 970 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 GPR39O43194 453 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 ITGB7P26010 798 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 VIPR1P32241 457 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 MDH1P40925 334 aaKnown RBP26.76■■□□□ 1.87
MSX1-201ENST00000382723 SERPINB8P50452 374 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 GRSF1Q12849 480 aaKnown RBP eCLIP26.76■■□□□ 1.87
MSX1-201ENST00000382723 LRRC14Q15048 493 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 HABP4Q5JVS0 413 aaKnown RBP26.76■■□□□ 1.87
MSX1-201ENST00000382723 PSAPL1Q6NUJ1 521 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 CAPS2Q9BXY5 557 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 INTS9Q9NV88 658 aaKnown RBP26.76■■□□□ 1.87
MSX1-201ENST00000382723 CRYL1Q9Y2S2 319 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 SLC30A1Q9Y6M5 507 aa26.76■■□□□ 1.87
MSX1-201ENST00000382723 FAM95CA0A1B0GW59 222 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 COPEO14579 308 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 NPC1O15118 1278 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 OGNP20774 298 aaKnown RBP26.75■■□□□ 1.87
MSX1-201ENST00000382723 NFKBIAP25963 317 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 PFKPQ01813 784 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 E2F5Q15329 346 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 PPM1JQ5JR12 505 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 CACUL1Q86Y37 369 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 SLC41A1Q8IVJ1 513 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 PIANPQ8IYJ0 282 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 PPP1R16AQ96I34 528 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 APOPT1Q96IL0 206 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 ELMO2Q96JJ3 720 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 NDNQ99608 321 aa26.75■■□□□ 1.87
MSX1-201ENST00000382723 C12orf65Q9H3J6 166 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms