RNA–Protein interactions for RNA: ENST00000379813.7

APTX-203, Transcript of aprataxin, humanhuman

TSL 5 BASIC

Gene APTX, Length 1,121 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-203ENST00000379813 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 QKIQ96PU8 341 aaKnown RBP eCLIP12.55□□□□□ -0.4
APTX-203ENST00000379813 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 KLF6Q99612 283 aaPredicted RBP12.55□□□□□ -0.4
APTX-203ENST00000379813 SH3GL2Q99962 352 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 SEMA3CQ99985 751 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 NUSAP1Q9BXS6 441 aaKnown RBP12.55□□□□□ -0.4
APTX-203ENST00000379813 TXLNGYQ9BZA5 131 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 AASDHPPTQ9NRN7 309 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 HAUS2Q9NVX0 235 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.4
APTX-203ENST00000379813 DKK3Q9UBP4 350 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 TP53BP1Q12888 1972 aaPredicted RBP12.55□□□□□ -0.4
APTX-203ENST00000379813 LRRK1Q38SD2 2015 aa12.55□□□□□ -0.4
APTX-203ENST00000379813 GOLGA6CA6NDK9 693 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 POM121BA6NF01 834 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 C5orf60A6NFR6 353 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 UPK3BL1B0FP48 263 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 UPK3BL2E5RIL1 263 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 AP3B1O00203 1094 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 SLC30A4O14863 429 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 AP1G1O43747 822 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 OPHN1O60890 802 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 GCATO75600 419 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 SPAG6O75602 509 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 GOLGA6DP0CG33 693 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 CCNB1P14635 433 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 CCNCP24863 283 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 HOXD12P35452 270 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 CTSKP43235 329 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 BASP1P80723 227 aaKnown RBP12.54□□□□□ -0.4
APTX-203ENST00000379813 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
APTX-203ENST00000379813 AP1B1Q10567 949 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 PRKD1Q15139 912 aaPredicted RBP12.54□□□□□ -0.4
APTX-203ENST00000379813 HIF1AQ16665 826 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 UGP2Q16851 508 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 HLA-BQ31612 363 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 CEP85LQ5SZL2 805 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 RNASEH2BQ5TBB1 312 aaKnown RBP12.54□□□□□ -0.4
APTX-203ENST00000379813 NAPEPLDQ6IQ20 393 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 ARHGEF18Q6ZSZ5 1173 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 RFLNAQ6ZTI6 216 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 PELI3Q8N2H9 469 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 TMEM145Q8NBT3 493 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 CEP76Q8TAP6 659 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 FAM76AQ8TAV0 307 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 NETO1Q8TDF5 533 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 BMFQ96LC9 184 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
APTX-203ENST00000379813 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 TMEM109Q9BVC6 243 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 TMEM9BQ9NQ34 198 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 MBNL1Q9NR56 388 aaKnown RBP12.54□□□□□ -0.4
APTX-203ENST00000379813 GOLGA6AQ9NYA3 693 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 SEPT10Q9P0V9 454 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 PNMA8BQ9ULN7 279 aaPredicted RBP12.54□□□□□ -0.4
APTX-203ENST00000379813 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
APTX-203ENST00000379813 E7EVH7 732 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 TTC4O95801 387 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 PRLP01236 227 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 ABHD2P08910 425 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 ALPIP09923 528 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 CD59P13987 128 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 GNSP15586 552 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 CTPS1P17812 591 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 CD68P34810 354 aaPredicted RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 MMP12P39900 470 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 ID4P47928 161 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 GRIA4P48058 902 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 AFF3P51826 1226 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 AP1S1P61966 158 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 RACK1P63244 317 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 ITKQ08881 620 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 WASHC5Q12768 1159 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 STAT4Q14765 748 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 AGBL2Q5U5Z8 902 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 ALG1LQ6GMV1 187 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 ITPRIPL1Q6GPH6 555 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 PRPF39Q86UA1 669 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 SLC22A18ASQ8N1D0 253 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 RIBC1Q8N443 379 aaPredicted RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 OR13H1Q8NG92 308 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 PDCD6IPQ8WUM4 868 aaKnown RBP12.53□□□□□ -0.4
APTX-203ENST00000379813 HTR3CQ8WXA8 447 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 LRRC39Q96DD0 335 aa12.53□□□□□ -0.4
APTX-203ENST00000379813 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms