RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SLC25A14O95258 325 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 CHEK2O96017 543 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 JUNP05412 331 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 EPHX1P07099 455 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 RHOQP17081 205 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 EEF1DP29692 281 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ELF3P78545 371 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 DPYSQ14117 519 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 BRMS1LQ5PSV4 323 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ADGRF1Q5T601 910 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 MFSD5Q6N075 450 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 IL27RAQ6UWB1 636 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 YIPF3Q9GZM5 350 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SMOC2Q9H3U7 446 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TAS2R13Q9NYV9 303 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 EIF2B4Q9UI10 523 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TLR6Q9Y2C9 796 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TCAF1Q9Y4C2 921 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SPO11Q9Y5K1 396 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 LRRC37A2A6NM11 1700 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 RNF103-CHMP3A0A140T963 221 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 H3BMM5 538 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ANGPT2O15123 496 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TM9SF1O15321 606 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 PRAMEF12O95522 483 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HIST1H2AGP0C0S8 130 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SLC2A4P14672 509 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HIST1H2ADP20671 130 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SOX9P48436 509 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TBL3Q12788 808 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TRIP4Q15650 581 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ARHGAP15Q53QZ3 475 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TEDDM1Q5T9Z0 273 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 GRTP1Q5TC63 336 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 RINLQ6ZS11 566 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 PARP8Q8N3A8 854 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 PDZD8Q8NEN9 1154 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ANKRD49Q8WVL7 239 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 VPS33AQ96AX1 596 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HIST1H2AHQ96KK5 128 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 MRGPRX2Q96LB1 330 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 LENG8Q96PV6 779 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 RBBP8Q99708 897 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HIST1H2AJQ99878 128 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 NAT9Q9BTE0 207 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 H2AFJQ9BTM1 129 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 THUMPD3Q9BV44 507 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 VPS51Q9UID3 782 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 RAD54BQ9Y620 910 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 CELSR3Q9NYQ7 3312 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 FAM149AA5PLN7 773 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SYN3O14994 580 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 TBC1D4O60343 1298 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 POLR2EP19388 210 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 NPY2RP49146 381 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 NEK2P51955 445 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HMGCS1Q01581 520 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 PGS1Q32NB8 556 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 OTUD3Q5T2D3 398 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 EMC10Q5UCC4 262 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 Q6ZVL8 140 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF534Q76KX8 674 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SPATS2Q86XZ4 545 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 MMAAQ8IVH4 418 aaKnown RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HERC6Q8IVU3 1022 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 SLC22A15Q8IZD6 547 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 LZTR1Q8N653 840 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 GBP7Q8N8V2 638 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 CHST14Q8NCH0 376 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 CALML6Q8TD86 181 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 DOK4Q8TEW6 326 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 KCTD13Q8WZ19 329 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 HGH1Q9BTY7 390 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 OSBPL6Q9BZF3 934 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 ZFYVE1Q9HBF4 777 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.1□□□□□ -1.11
CKAP2-203ENST00000378037 A0A1B0GVM2 712 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 SHOX2O60902 331 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-203ENST00000378037 EPB42P16452 691 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 ITGALP20701 1170 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 KCNA5P22460 613 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 AQP1P29972 269 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 PXNP49023 591 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-203ENST00000378037 CDK16Q00536 496 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 XRCC4Q13426 336 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 PWP1Q13610 501 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 TIGD2Q4W5G0 525 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 RAET1GQ6H3X3 334 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 ITIH5Q86UX2 942 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF419Q96HQ0 510 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-203ENST00000378037 SLC2A13Q96QE2 648 aa8.09□□□□□ -1.11
CKAP2-203ENST00000378037 OLFM1Q99784 485 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms