RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLC14A2Q15849 920 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 GUSBP11Q6P575 273 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 CRTC1Q6UUV9 634 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 Q6ZVL8 140 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 ZNF765Q7L2R6 523 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 EFL1Q7Z2Z2 1120 aaKnown RBP16.8■□□□□ 0.28
HMGN4-201ENST00000377575 NT5DC3Q86UY8 548 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 RAVER1Q8IY67 606 aaKnown RBP16.8■□□□□ 0.28
HMGN4-201ENST00000377575 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 CNTD1Q8N815 330 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 ARL10Q8N8L6 244 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 DCBLD1Q8N8Z6 715 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 EXD1Q8NHP7 514 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 MDM1Q8TC05 714 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 MAPK15Q8TD08 544 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 TFB1MQ8WVM0 346 aaKnown RBP16.8■□□□□ 0.28
HMGN4-201ENST00000377575 OR1E3Q8WZA6 343 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 LYSMD1Q96S90 227 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 BAG1Q99933 345 aaPredicted RBP16.8■□□□□ 0.28
HMGN4-201ENST00000377575 TEX101Q9BY14 249 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 MOSPD1Q9UJG1 213 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 hCG_1818297A0A087WSY0 165 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 PRSS38A1L453 326 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 CPED1A4D0V7 1026 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
HMGN4-201ENST00000377575 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 MT-CO3P00414 261 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 PRLP01236 227 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 CAPNS1P04632 268 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 MMP2P08253 660 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 GPR1P46091 355 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 VAV2P52735 878 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 STC1P52823 247 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 IHHQ14623 411 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 PRKD1Q15139 912 aaPredicted RBP16.79■□□□□ 0.28
HMGN4-201ENST00000377575 PTPRRQ15256 657 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 TCEA2Q15560 299 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 RAD9BQ6WBX8 426 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 TECPR1Q7Z6L1 1165 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 SLC35F3Q8IY50 421 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 NRSN1Q8IZ57 195 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 PELI3Q8N2H9 469 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 P3H4Q92791 437 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 AP2M1Q96CW1 435 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 IMP4Q96G21 291 aaKnown RBP16.79■□□□□ 0.28
HMGN4-201ENST00000377575 DEPDC7Q96QD5 511 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 LGR4Q9BXB1 951 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 CEP41Q9BYV8 373 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 SLC25A51Q9H1U9 297 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 CYP4F12Q9HCS2 524 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 MRPL40Q9NQ50 206 aaKnown RBP16.79■□□□□ 0.28
HMGN4-201ENST00000377575 GPR34Q9UPC5 381 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 RP1P56715 2156 aa16.79■□□□□ 0.28
HMGN4-201ENST00000377575 ANKRD11Q6UB99 2663 aaPredicted RBP16.79■□□□□ 0.28
HMGN4-201ENST00000377575 ASXL3Q9C0F0 2248 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 COL27A1Q8IZC6 1860 aaPredicted RBP16.78■□□□□ 0.28
HMGN4-201ENST00000377575 ACACAQ13085 2346 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 C1orf232A0A0U1RR37 186 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 SRRM3A6NNA2 597 aaPredicted RBP16.78■□□□□ 0.28
HMGN4-201ENST00000377575 MTSS1O43312 755 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 PECAM1P16284 738 aaPredicted RBP16.78■□□□□ 0.28
HMGN4-201ENST00000377575 CTNNA1P35221 906 aaKnown RBP16.78■□□□□ 0.28
HMGN4-201ENST00000377575 MARCKSL1P49006 195 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 COPS2P61201 443 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 PTSQ03393 145 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 TAF8Q7Z7C8 310 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 KYQ8NBH2 561 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 ACRBPQ8NEB7 543 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 WDR48Q8TAF3 677 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 CCHCR1Q8TD31 782 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 MLPHQ9BV36 600 aaPredicted RBP16.78■□□□□ 0.28
HMGN4-201ENST00000377575 NRSN2Q9GZP1 204 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 SIRPGQ9P1W8 387 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 CD84Q9UIB8 345 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 PADI4Q9UM07 663 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 ZZEF1O43149 2961 aa16.78■□□□□ 0.28
HMGN4-201ENST00000377575 ZFC3H1O60293 1989 aaKnown RBP16.78■□□□□ 0.28
HMGN4-201ENST00000377575 SCN8AQ9UQD0 1980 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 A0A0U1RQS6 177 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 RCCD1A6NED2 376 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 ANKRD66B4E2M5 251 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 KRT37O76014 449 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 CLDN7O95471 211 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 PTPN3P26045 913 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 CYP4F3Q08477 520 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 GALNT3Q14435 633 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 LLGL1Q15334 1064 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 QPCTQ16769 361 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 CDCP2Q5VXM1 449 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 KCTD16Q68DU8 428 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 ADAMTSL4Q6UY14 1074 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 NYAP1Q6ZVC0 841 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 NLRP8Q86W28 1048 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 OR6C4Q8NGE1 309 aa16.77■□□□□ 0.28
HMGN4-201ENST00000377575 KRT35Q92764 455 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms