RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ALDOAP04075 364 aaKnown RBP16.8■□□□□ 0.28
VARS-215ENST00000375663 DGKAP23743 735 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 CHRNA4P43681 627 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 CDH15P55291 814 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 INO80DQ53TQ3 878 aaPredicted RBP16.8■□□□□ 0.28
VARS-215ENST00000375663 TAC4Q86UU9 113 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 AMER2Q8N7J2 671 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 PSMA8Q8TAA3 256 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 EMID1Q96A84 441 aaPredicted RBP16.8■□□□□ 0.28
VARS-215ENST00000375663 C12orf42Q96LP6 360 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 DYRK4Q9NR20 520 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 ST3GAL5Q9UNP4 418 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 DNAJA2O60884 412 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 NTRK1P04629 796 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 EPB42P16452 691 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 LPOP22079 712 aaPredicted RBP16.8■□□□□ 0.28
VARS-215ENST00000375663 RPL9P32969 192 aaKnown RBP16.8■□□□□ 0.28
VARS-215ENST00000375663 POLR2JP52435 117 aaKnown RBP16.8■□□□□ 0.28
VARS-215ENST00000375663 CCDC142Q17RM4 750 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 EGFLAMQ63HQ2 1017 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 THAP5Q7Z6K1 395 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 SYT12Q8IV01 421 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 ZHX1-C8orf76Q96EF9 292 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 FAM105AQ9NUU6 356 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 ADGRE2Q9UHX3 823 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 CNTRLQ7Z7A1 2325 aa16.8■□□□□ 0.28
VARS-215ENST00000375663 MYBPHLA2RUH7 354 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 MATN3O15232 486 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ALDH2P05091 517 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ACSM2AQ08AH3 577 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ZNF846Q147U1 533 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ARMC12Q5T9G4 340 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ACSM2BQ68CK6 577 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 PLD6Q8N2A8 252 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 PHF12Q96QT6 1004 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 NUAK2Q9H093 628 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 PIGVQ9NUD9 493 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 PRKAG2Q9UGJ0 569 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 A8MX80 341 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 MATN2O00339 956 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 KPNA6O60684 536 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 OR6B1O95007 311 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 EGFRP00533 1210 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 NR4A1P22736 598 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 EPHX2P34913 555 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 RPL26P61254 145 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 NRG1Q02297 640 aaPredicted RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 MTA1Q13330 715 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 RFX4Q33E94 735 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 LDLRAP1Q5SW96 308 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CRTC3Q6UUV7 619 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 DDX53Q86TM3 631 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 ZC3HC1Q86WB0 502 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 POC5Q8NA72 575 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 COX4I2Q96KJ9 171 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 SLC25A51Q9H1U9 297 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 EPB41L1Q9H4G0 881 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CAB39Q9Y376 341 aaPredicted RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 MFHAS1Q9Y4C4 1052 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 NCK1P16333 377 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CCR3P51677 355 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 DSC2Q02487 901 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 LCP2Q13094 533 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 TSTD2Q5T7W7 516 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ZNF605Q86T29 641 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 MCOLN3Q8TDD5 553 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 PCED1BQ96HM7 432 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 SLC39A3Q9BRY0 314 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ASB8Q9H765 288 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 PREBQ9HCU5 417 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 TMPRSS4Q9NRS4 437 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 KLHL3Q9UH77 587 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ITGB1BP2Q9UKP3 347 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 POLR3HQ9Y535 204 aaPredicted RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 PPEF2O14830 753 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 LZTS3O60299 673 aaPredicted RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 THRBP10828 461 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CLCQ05315 142 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 C1DQ13901 141 aaKnown RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 CPSF6Q16630 551 aaKnown RBP eCLIP16.79■□□□□ 0.28
VARS-215ENST00000375663 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 KIAA0930Q6ICG6 404 aaPredicted RBP16.79■□□□□ 0.28
VARS-215ENST00000375663 GALNT18Q6P9A2 607 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 C16orf59Q7L2K0 433 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 ADGRG6Q86SQ4 1221 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 S100ZQ8WXG8 99 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 OR52E6Q96RD3 313 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 CYTH4Q9UIA0 394 aa16.79■□□□□ 0.28
VARS-215ENST00000375663 KIF13AQ9H1H9 1805 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 MOXD2PA6NHM9 499 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 ANXA5P08758 320 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 DBTP11182 482 aaKnown RBP16.78■□□□□ 0.28
VARS-215ENST00000375663 SCNN1AP37088 669 aa16.78■□□□□ 0.28
VARS-215ENST00000375663 MTHFRP42898 656 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms