RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 HSPA1BP0DMV9 641 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CYP3A5P20815 502 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 TNK2Q07912 1038 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 STX5Q13190 355 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 NOMO1Q15155 1222 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 DLG2Q15700 870 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 C6orf10Q5SRN2 563 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 TMTC4Q5T4D3 741 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SH3PXD2AQ5TCZ1 1133 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 TFAP2DQ7Z6R9 452 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SLCO6A1Q86UG4 719 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 ASCC1Q8N9N2 400 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 MCUQ8NE86 351 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 APPL2Q8NEU8 664 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 OR2T34Q8NGX1 318 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 OR2T3Q8NH03 318 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 ANGPTL6Q8NI99 470 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CSF3RQ99062 836 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CALN1Q9BXU9 219 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 RAP2CQ9Y3L5 183 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 ZSCAN5BA6NJL1 495 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 TRIM13O60858 407 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 BCAS1O75363 584 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 RFPL2O75678 378 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 ITIH1P19827 911 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SERPINB10P48595 397 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 TAF6P49848 677 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 RPL14P50914 215 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 LILRA4P59901 499 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 ILF2Q12905 390 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CARTPTQ16568 116 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 TBCELQ5QJ74 424 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 RSBN1Q5VWQ0 802 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 PIWIL3Q7Z3Z3 882 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SLC2A14Q8TDB8 520 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 ZFP90Q8TF47 636 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CLEC4CQ8WTT0 213 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CANT1Q8WVQ1 401 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 MARK4Q96L34 752 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
C9orf3-203ENST00000375315 CENPOQ9BU64 300 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 LHPPQ9H008 270 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 MUC3BQ9H195 1237 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SPAG4Q9NPE6 437 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 RAD54BQ9Y620 910 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 SLCO1B7G3V0H7 640 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 TRIM24O15164 1050 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 ACOX3O15254 700 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 KCNN4O15554 427 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MAP3K6O95382 1288 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 ITGB1P05556 798 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 IL10P22301 178 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 GARSP41250 739 aaKnown RBP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 ARPP19P56211 112 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 CLCQ05315 142 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 RALGDSQ12967 914 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 IRF5Q13568 498 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MBTPS1Q14703 1052 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MAPRE2Q15555 327 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 SAMD4BQ5PRF9 694 aaKnown RBP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 TMEM198Q66K66 360 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 GTF2IRD2BQ6EKJ0 949 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 CYS1Q717R9 158 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 GTF2IRD2Q86UP8 949 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 ATL1Q8WXF7 558 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 RSAD1Q9HA92 442 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MOCS1Q9NZB8 636 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 VTI1BQ9UEU0 232 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 AURKCQ9UQB9 309 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MYO7AQ13402 2215 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 TCRBV5S1A1TA0A578 114 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 EVPLLA8MZ36 301 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MPSTP25325 297 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 FASP25445 335 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 POLR2IP36954 125 aaKnown RBP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 PTPN9P43378 593 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 ZNF132P52740 706 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 MMRN1Q13201 1228 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 UBE2UQ5VVX9 321 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 CYP4V2Q6ZWL3 525 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 DBF4BQ8NFT6 615 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 LRRN4Q8WUT4 740 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 TRIM63Q969Q1 353 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 ZUFSPQ96AP4 578 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 SIGLEC10Q96LC7 697 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 POLE4Q9NR33 117 aa12.15□□□□□ -0.46
C9orf3-203ENST00000375315 SMPD3Q9NY59 655 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-203ENST00000375315 CCRL2O00421 344 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 SYNCRIPO60506 623 aaKnown RBP12.15□□□□□ -0.47
C9orf3-203ENST00000375315 ABCB7O75027 752 aa12.15□□□□□ -0.47
C9orf3-203ENST00000375315 TFE3P19532 575 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms